Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3461 |
Symbol | |
ID | 5194650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3864717 |
End bp | 3865514 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640587909 |
Product | Acyl-CoA thioesterase-like protein |
Protein accession | YP_001268771 |
Protein GI | 148548669 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1946] Acyl-CoA thioesterase |
TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.985746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.000330564 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATTTCA ACCAACTGCT CGACGCCGTG CGCGCCAACC CGGATTCCGT CAGCATTCCG CCCAGCTGGG CCCAGGGGCG CGCTGCCTTT GGCGGCCTGA TGGCGGCCAT GGTGTATGAG ACCATGCGCC TTAGGCTCTG CGACAGCCGC CCGGTACGCT CATTGGCCAT CAGCTTCGTG GCGCCAGCGG CGGCGGATGT GCCCATCCGC TTCGAGGTGG AGGTTTTGCG CGAAGGCAAG GCGGTTAGCA CGTTGCTGGG CCGCGCGGTT CAGGATGGCC AGGTGGTGAC TTTGGTGCAG GGCAATTTCG GTGCGGGCCG CCCTTCGGTG GTCGAAGTGC CGGCGTTACC GGCCATTGAA ATGCCTGCGC TCGAAGAGGC GGCCCCGGAG TTGCCCTATA TCAAAGGCGT TACCCCGGAG TTCATGCGCC ACGTGGCCCT GCGCTGGGCA GTAGGCGGGC TGCCGTTCAG TGGCAATCAG TCGCGCAAGA TGGGCGGCTG GGTGCGTTTG CGGGATGTGG CTGACGAGCC GGTGAACGAG GCGCACTTGC TGGCGTTGGT GGATGCGTGG CCGCCCAGCC TTATGCCGTT TCTCAAGCAG CCCGCTGCGG GCAGTACGCT GACCTGGACC ATCGAGTTCA TCCAGCCAAC GGCGAAGCTT TCGACCCAGG AGTGGTGTCG GTACTGCGTG GAAACCGAGC ATGCGCGGGA TGGCTATGGT CATGCTGCCG CGGCGTTGTG GACGGCGCAG GGCGAGTTGT TGGCCTTGAG CCGGCAGACC GTCACCGTTT TCGCCTGA
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Protein sequence | MNFNQLLDAV RANPDSVSIP PSWAQGRAAF GGLMAAMVYE TMRLRLCDSR PVRSLAISFV APAAADVPIR FEVEVLREGK AVSTLLGRAV QDGQVVTLVQ GNFGAGRPSV VEVPALPAIE MPALEEAAPE LPYIKGVTPE FMRHVALRWA VGGLPFSGNQ SRKMGGWVRL RDVADEPVNE AHLLALVDAW PPSLMPFLKQ PAAGSTLTWT IEFIQPTAKL STQEWCRYCV ETEHARDGYG HAAAALWTAQ GELLALSRQT VTVFA
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