Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3449 |
Symbol | |
ID | 5191866 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3853348 |
End bp | 3854325 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640587897 |
Product | ErfK/YbiS/YcfS/YnhG family protein |
Protein accession | YP_001268759 |
Protein GI | 148548657 |
COG category | [S] Function unknown |
COG ID | [COG1376] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000148197 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0000281321 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTTGCCGC GCTTTCCTGC CGTCACCCGT AGCCTGTCCC TGGCCGCCCT GTTGGTAGCG GGCCCCGCTG CTGCGCTGGA GCTGCCACTG CCACCGCCCG GTGAAGACAT CGTCGGCCAG GTGCATGTGA TCAAGGCAAA GTACGAGGAC ACGTTCGCCG ATATCGGCAC CGCAAACGAC CTCGGCTACC TGGAAATGAT TGCCGCCAAC CCCGGCGTGG ACCCTTGGCT GCCGGGTGCC GGCACCGAGA TCATCCTGCC GACCCGTTTC GTTCTGCCGC CGGGGCCGCG CGAAGGCATC GTCATCAACC TGGCCGAGTA CCGCATGTAC TACTTCCCCA AGGGGGAGAG CGTGGTGTAC ACCTTCCCGC TGGGCATTGG TCGCGAGGGG TGGGGGTCGC CGATCGCCAA CACCAAGATC ACCGCCAAGA CGCCCAACCC GACCTGGACG CCGCCCGCTT CGATTCGCAA AGAGCACGCC GAGGACGGTG ACATCCTGCC GACGGTGGTG CCGGCTGGCC CGGACAACCC GCTGGGGCCG TTCAAGTTCA CCTTGGGCGT ACCGGGCTAT CTGATCCATG GTTCGAACAA GAAGTTCGGC ATTGGCATGC GCACCAGTCA CGGTTGCTTC CGCATGCTTA ACAACAATGT GCTTGAACTG TCGAAGATGG TGCCGGTGGG GACGCCAGTG CGCATCATCA ACGAGCCTTA CAAGTTCGGT ATCAGCGCCG GCAAGGTCTA TCTTGAGGCA CACACGCCGC TGGATGACCA GGGTAACCCG TCAGTGGTCG ACAAACACAC CGCAGTTATC AATGCCTTGC TCAAGCGTGA AGACCTGGCC AATAACCTAC GCATGAACTG GGACATGGTA CGTGACGTGG TGGCTGCAGA AGATGGCATG CCGGTAGAAA TTGCCGTGCC GGTGGAAAAC CAAGGGGCCG CACCGATGGT GTCGAGCATT CCGCCCGAAC TGCAGTAA
|
Protein sequence | MLPRFPAVTR SLSLAALLVA GPAAALELPL PPPGEDIVGQ VHVIKAKYED TFADIGTAND LGYLEMIAAN PGVDPWLPGA GTEIILPTRF VLPPGPREGI VINLAEYRMY YFPKGESVVY TFPLGIGREG WGSPIANTKI TAKTPNPTWT PPASIRKEHA EDGDILPTVV PAGPDNPLGP FKFTLGVPGY LIHGSNKKFG IGMRTSHGCF RMLNNNVLEL SKMVPVGTPV RIINEPYKFG ISAGKVYLEA HTPLDDQGNP SVVDKHTAVI NALLKREDLA NNLRMNWDMV RDVVAAEDGM PVEIAVPVEN QGAAPMVSSI PPELQ
|
| |