Gene Pput_3395 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3395 
Symbol 
ID5191024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3811816 
End bp3812565 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content60% 
IMG OID640587843 
Productphage-encoded protein 
Protein accessionYP_001268705 
Protein GI148548603 
COG category[S] Function unknown 
COG ID[COG3645] Uncharacterized phage-encoded protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000514274 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCAGA CCATCCAAAG CAATACCGTG GCCCTCGCGC CACAAAATCC TAACCACGGT 
TTCGTGGCGC GCGAGGTCAC GATGAGCAGC TCGGAGATTG CCGAGCTGAC TGGAAAGCTC
CACAAAAACG TCATTCGCGA TATCCGCGAG ATGATTGATG CGCTGAAAGA GGATGGCTCA
GATCTGAGCC ATGTCCGAGA AGACAAGGAC GGCCGGGGAT ACACGTCAGA ATTTCACCTT
GACCGGGAGC TGACCGAGAC ACTGCTTACC GGCTATAGCA TCCCATTACG TCGGAAGGTG
ATCCATCGGC TGCATGAACT GGAGCAGGCG GCGACCCCTC GCGTCTTGGC AACACTGCCT
GATTTCTCCA ACCCTGTTGC CGCCGCCCGC GCCTGGGCCG ACGAGATGGA GCAGAAGCAG
ATCGCCCAAC AGGCCCTAGC CATCGCTGCG CCCAAAGTCG AGTTCGTCGA CAAGTACGTC
CAGTCGACCG GCCTCAAGGG ATTCCGCCAG ACCGCCAAGC TGCTGAGGGC TAATGAGGCC
CGCTTCCGCG AGTTCCTGCT CGACAAGAAG ATCATGTACC GAATGGGCGG CGAGTGGCAG
GCCTACCAGC AGCACATCGA CGCCGGCCGG TTCTCTGTGA AGACCGGTAC CAGTGACAGC
GGCCACGCCT TCAATCAAGC CAAATTCACC CCAAAGGGCG TCACCTGGGT GGCCGGCCTG
TGGGCACAGT ACAACCTGGA GGCCCAATGA
 
Protein sequence
MHQTIQSNTV ALAPQNPNHG FVAREVTMSS SEIAELTGKL HKNVIRDIRE MIDALKEDGS 
DLSHVREDKD GRGYTSEFHL DRELTETLLT GYSIPLRRKV IHRLHELEQA ATPRVLATLP
DFSNPVAAAR AWADEMEQKQ IAQQALAIAA PKVEFVDKYV QSTGLKGFRQ TAKLLRANEA
RFREFLLDKK IMYRMGGEWQ AYQQHIDAGR FSVKTGTSDS GHAFNQAKFT PKGVTWVAGL
WAQYNLEAQ