Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3395 |
Symbol | |
ID | 5191024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3811816 |
End bp | 3812565 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640587843 |
Product | phage-encoded protein |
Protein accession | YP_001268705 |
Protein GI | 148548603 |
COG category | [S] Function unknown |
COG ID | [COG3645] Uncharacterized phage-encoded protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00000514274 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCAGA CCATCCAAAG CAATACCGTG GCCCTCGCGC CACAAAATCC TAACCACGGT TTCGTGGCGC GCGAGGTCAC GATGAGCAGC TCGGAGATTG CCGAGCTGAC TGGAAAGCTC CACAAAAACG TCATTCGCGA TATCCGCGAG ATGATTGATG CGCTGAAAGA GGATGGCTCA GATCTGAGCC ATGTCCGAGA AGACAAGGAC GGCCGGGGAT ACACGTCAGA ATTTCACCTT GACCGGGAGC TGACCGAGAC ACTGCTTACC GGCTATAGCA TCCCATTACG TCGGAAGGTG ATCCATCGGC TGCATGAACT GGAGCAGGCG GCGACCCCTC GCGTCTTGGC AACACTGCCT GATTTCTCCA ACCCTGTTGC CGCCGCCCGC GCCTGGGCCG ACGAGATGGA GCAGAAGCAG ATCGCCCAAC AGGCCCTAGC CATCGCTGCG CCCAAAGTCG AGTTCGTCGA CAAGTACGTC CAGTCGACCG GCCTCAAGGG ATTCCGCCAG ACCGCCAAGC TGCTGAGGGC TAATGAGGCC CGCTTCCGCG AGTTCCTGCT CGACAAGAAG ATCATGTACC GAATGGGCGG CGAGTGGCAG GCCTACCAGC AGCACATCGA CGCCGGCCGG TTCTCTGTGA AGACCGGTAC CAGTGACAGC GGCCACGCCT TCAATCAAGC CAAATTCACC CCAAAGGGCG TCACCTGGGT GGCCGGCCTG TGGGCACAGT ACAACCTGGA GGCCCAATGA
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Protein sequence | MHQTIQSNTV ALAPQNPNHG FVAREVTMSS SEIAELTGKL HKNVIRDIRE MIDALKEDGS DLSHVREDKD GRGYTSEFHL DRELTETLLT GYSIPLRRKV IHRLHELEQA ATPRVLATLP DFSNPVAAAR AWADEMEQKQ IAQQALAIAA PKVEFVDKYV QSTGLKGFRQ TAKLLRANEA RFREFLLDKK IMYRMGGEWQ AYQQHIDAGR FSVKTGTSDS GHAFNQAKFT PKGVTWVAGL WAQYNLEAQ
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