Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3340 |
Symbol | |
ID | 5195333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3763528 |
End bp | 3763989 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640587787 |
Product | response regulator receiver protein |
Protein accession | YP_001268650 |
Protein GI | 148548548 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCAAGC CCATTCTGCT GGTCGAAGAC AATCCCCGAG ACCTGGAGCT GACCCTGCTG GCCCTGGAGC GCAGCCAGTT GGCCAACGAG GTCATCGTGC TGCGTGACGG CGCCGATGCG CTCGACTACT TGCTGCGCCG CAACGCCTAT GCCGAGCGCG ATGACGGCAA CCCTGCCGTG CTGTTACTCG ACCTGAAACT GCCTAAGGTC GACGGCCTGG AAGTGCTCAA GGAAGTGCGC GCCACTGCCG AACTGCGCAG CATCCCCACC GTGATGCTGA CCTCTTCGCG CGAAGAGCCC GACCTGCTGC GCGCCTACGA GCTGGGGGTA AACGCTTATG TGGTCAAACC CGTGGAGTTC AAGGAATTCG TCACCGCCAT CTCCGACCTC GGGGTATTCT GGGCAGTGCT AAACGAACCG CCACCCGGCT CACTGCGACT GAACCGTCGC GGTAGCAACT GA
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Protein sequence | MLKPILLVED NPRDLELTLL ALERSQLANE VIVLRDGADA LDYLLRRNAY AERDDGNPAV LLLDLKLPKV DGLEVLKEVR ATAELRSIPT VMLTSSREEP DLLRAYELGV NAYVVKPVEF KEFVTAISDL GVFWAVLNEP PPGSLRLNRR GSN
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