| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3324 |
|---|
| Symbol | |
|---|
| ID | 5192686 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3742518 |
|---|
| End bp | 3744170 |
|---|
| Gene Length | 1653 bp |
|---|
| Protein Length | 550 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640587771 |
|---|
| Product | sulfite reductase (ferredoxin) |
|---|
| Protein accession | YP_001268634 |
|---|
| Protein GI | 148548532 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.49324 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACGTAT ACGACGAGTA CGATCAGCGG ATCATCGAGG ACCGCGTCAA GCAGTTCCGT
GATCAGACCC GCCGCTACCT GGCCGGTGAG CTGAGCGAAG AAGAATTCCG CCCTCTGCGC
CTGCAGAACG GCCTATACAT CCAACGTTTC GCGCCGATGC TGCGTGTCGC GGTGCCGTAC
GGCCAGCTGA ACGCCAACCA GGTCCGCACC CTGGCCAAGA TCGCTCGCGA CTATGACAAG
GGCTATGCCC ACATTTCCAC CCGCCAGAAC GTGCAGTTCA ACTGGCCGGC GCTGGAAGAC
ATCCCCGACA TCCTCGCCGA GCTGGCCACC GTGCAGATGC ACGCGATCCA GACCAGCGGC
AACTGCCTGC GCAACACCAC CACCGACCAG TTCGCCGGTG TGGCCGCAGA CGAGATCGTC
GACCCGCGCC CGTGGTGTGA AATCGTCCGT CAGTGGACCA CCTTCCACCC GGAATTCGCC
TACCTGCCAC GCAAATTCAA GATCGCCATC AACGGTTCGC AGGAAGACCG CGCCGCCATC
GAAGTGCACG ACATTGGCCT TGAGCCCGTG CGCAACGCTG CCGGCGAACT GGGCTTCCGA
GTGCTGGTCG GTGGCGGCCT GGGCCGTACC CCGGTGGTGG GCTCGTTCAT CAACGAGTTC
CTGCCGTGGC AGGACCTGAT CAGCTACCTC GATGCCATCC TGCGCGTGTA CAACCGTTAC
GGTCGCCGTG ACAACAAGTA CAAGGCGCGG ATCAAGATTC TGGTCAAGGC CCTTACCCCG
GAAGTGTTCG CCGAAAAGGT CGAGGCCGAA ATGGTCCACC TGCGTGGCGG CACCACCACC
CTGACCGAAG CCGAAGTGCA ACGCGTATCG CGCCACTTCG TCGACCCCGA GTACCTCGCA
CTCGACAACG TCGACTACAC CGCCCTGGAT GCCGAGCACC CAGGGTTCGC CCGCTGGCGC
TCGCGCAACA CCCGCGCCCA CAAGCGCCCG GGCTACGTGG CTGTTACCCT GTCACTCAAG
CCTACCGGTG TTGCCCCGGG CGACGTGACC GACAAGCAGC TGGACGCCGT GGCCGACCTG
GCCGAACGCT ACAGCTTCGG CTTCCTGCGC ACCTCGCACG AGCAGAACAT CATCCTCGCC
GACGTCGAGC AGCGCCAGCT GCACGCGCTG TGGCTTGAAC TGCGCGAAGG CGGCTTCGCT
ACCCCGAACA TCGGCCTGCT GACCGACATC ATCTGCTGCC CGGGTGGCGA CTACTGCTCG
CTGGCAAACG CCAAGTCGAT CCCGATTGCC GAGTCCATCC AGCGCCGCTT CGACGACCTG
GACTACCTGT TCGACATCGG CGAAATCGAC CTGAACATCT CCGGCTGCAT GAACGCCTGC
GGCCACCACC ACGTGGGCCA CATCGGCATC CTCGGCGTGG ACAAGAAGGG TGAGGAGTTC
TACCAGGTGT CGCTGGGCGG CAACGCCGCA CGCGGCGCAA GCCTGGGCAA GATCCTTGGC
CCGTCCTTCG CGCAGGATGA CATGGCCGAT GTGATCGAGA AGCTGATCGC CGTGTACGTC
GAGCAACGTA CCGAGGAAGA GCGTTTCATC GACACCTACC AGCGTATCGG CATCGACCCC
TTCAAGGAAC GCGTCTATGC AGCGAATCAT TAA
|
|---|
| Protein sequence | MYVYDEYDQR IIEDRVKQFR DQTRRYLAGE LSEEEFRPLR LQNGLYIQRF APMLRVAVPY
GQLNANQVRT LAKIARDYDK GYAHISTRQN VQFNWPALED IPDILAELAT VQMHAIQTSG
NCLRNTTTDQ FAGVAADEIV DPRPWCEIVR QWTTFHPEFA YLPRKFKIAI NGSQEDRAAI
EVHDIGLEPV RNAAGELGFR VLVGGGLGRT PVVGSFINEF LPWQDLISYL DAILRVYNRY
GRRDNKYKAR IKILVKALTP EVFAEKVEAE MVHLRGGTTT LTEAEVQRVS RHFVDPEYLA
LDNVDYTALD AEHPGFARWR SRNTRAHKRP GYVAVTLSLK PTGVAPGDVT DKQLDAVADL
AERYSFGFLR TSHEQNIILA DVEQRQLHAL WLELREGGFA TPNIGLLTDI ICCPGGDYCS
LANAKSIPIA ESIQRRFDDL DYLFDIGEID LNISGCMNAC GHHHVGHIGI LGVDKKGEEF
YQVSLGGNAA RGASLGKILG PSFAQDDMAD VIEKLIAVYV EQRTEEERFI DTYQRIGIDP
FKERVYAANH
|
|---|
| |