| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3310 |
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| Symbol | |
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| ID | 5190538 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3727288 |
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| End bp | 3727980 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587757 |
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| Product | AzlC family protein |
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| Protein accession | YP_001268620 |
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| Protein GI | 148548518 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
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| TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.294738 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.172837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCACA TCGCCCGCCA AGCCTTTCTT CACGGCGCCA TTGCCATTCT CCCGTTGTCC
CTGGCCGTTG CCCCTTGGGG CCTGCTGGCC GGTTCCATGG CCATCGAGGC CAACCTCAGC
GCCTGGCAGG GGCAGGGGCT GTCGGCCATC GTCTTCGCCG GCGCTGCGCA GTTGGTGGCC
ATTGGCATGC TCAAAGGAGG GGCCAATCTG GCATCGATCC TGCTCACCAC CCTGCTGCTG
ACCTCGCAGC ACCTGCTGTA TGGCCTGTCG ATGCGACCGG TACTGTCCAG CCAGCCGCTG
CGCTGGCGCC TGGGCCTGGG CTTTCTGCTG ACCGACGAAT TCTTCGCCCT GACCAGCCAG
TACGACCGGC AGCAATTCAA CCGCTGGTAT GCCTTGGGGG TGGGCCTGAC CTTCTACATC
GCCTGGAACC TGTTCACCCT GGCCGGCATA CTGCTGGGCC AGAACATTCC ACACCTGGAC
CAGTTCGGCC TGGATTTCTC CATTGTCGCC ACTTTTGTCG CCCTGATCGC GCCGCTGGTG
CGCAACCTGG CCACCGTGGT GTGCGTAGCC GTGTCGCTAT TCTGTTCGGT GCTGTTCAGC
TACTGGCACT GGGAAACCGC CCTGGTGGTC GCAGGCCTGC TGGGCATGAG CGCCGGGTTC
ATCTGCCAGA AATTCGCCGG AGCCCGCGCA TGA
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| Protein sequence | MPHIARQAFL HGAIAILPLS LAVAPWGLLA GSMAIEANLS AWQGQGLSAI VFAGAAQLVA
IGMLKGGANL ASILLTTLLL TSQHLLYGLS MRPVLSSQPL RWRLGLGFLL TDEFFALTSQ
YDRQQFNRWY ALGVGLTFYI AWNLFTLAGI LLGQNIPHLD QFGLDFSIVA TFVALIAPLV
RNLATVVCVA VSLFCSVLFS YWHWETALVV AGLLGMSAGF ICQKFAGARA
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