Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3302 |
Symbol | |
ID | 5192914 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3718074 |
End bp | 3720434 |
Gene Length | 2361 bp |
Protein Length | 786 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640587749 |
Product | DNA polymerase II |
Protein accession | YP_001268612 |
Protein GI | 148548510 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0835238 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGTTGC AGCAGGGTTT TGTCCTGACC CGGCACTGGC ACGATACGCC GGAAGGCACC TGCGTGGAGT TCTGGCTGGC CACCGATGCC GGGCCCCGGC TGTTGCGGCT GGCGGCGCAG GAGTCGGTGG CTTTCATTCC TCAGGCGCAG GCCGAGCATG CCCGTGTGCT GCTGGCCAAC GAAGCAGGGA CCAAGCTCAA GCCATTGCGC CTGAAGGACT TCGAGCATCG CCCGATGCTC GGCCTGTATG CCCGCCAGCA TCGCCAGTTG ATGCAACTGG AGCAGCGTCT GCGCACGGCC GGTATCGACG TGTTCGAGGC CGATATCCGC CCGCCGGAGC GTTACCTCAT GGAGCGCTTC ATCACGGCGC CGGTGCAGTT CACTGGTCAG CCGGATGCGC AGGGCGTTTA CCGGGACGCC CAGCTCAAGC CGCAGCCAGG CTATCGCCCG GCGCTGCGCC TGGTGTCGCT GGACATCGAG ACCAGCGAGC GTGGCGAGCT GTACAGCATC GCGCTGGAGG GCTGTGGTCA GCGCCAGGTG TACATGCTCG GCCCGGCCAA CGGCGATGCC ACCGGGCTTG ACTTCGACCT GGAGTATTGC GCCGATCGCG CCGCCTTGAT TACCCGGCTC AACCAGTGGA TGGCCAAGCA TGACCCGGAC GCGATCATTG GCTGGAACCT GGTGCAGTTC GACCTGCGCC TGCTGCATGA GCACGCCAAG TCATTGCAGG TGCCACTGGC CCTGGGGCGC AACGGTGCGG TCATGACCCT GCGCAGCCAT GCCGGTGGCG GCCATGTCTT CGCCGATGCG CCGGGGCGGC TGCTGATCGA TGGCATCGAG GCGTTGCGTT CGGCCACCTG GAGCTTTGCC TCGTTCAGCC TGGAGAACGT TGCCCAGACC CTGCTGGGTG AAGGCAAGGC CATCGACACG CCGTACCAAC GCATGGACGA AATCAATCGC CGCTTCGCCG AAGACAAACC GGCCCTGGCG CGCTACAACC TGAAGGACTG CGAACTGGTC ACGCGCATTT TCGCCCATAC CCGGCTGCTC GACTTCCTGC TCGAACGTGC CTCGGTGACG GGATTGGCCG TGGACCGCAG CGGTGGGTCG GTAGCTGCGT TCTGTCACTT GTACATTCCA CAGATGCACC GCCTTGGCTT TGTCGCGCCC AGCCTTGGCA GCCGCCCTGA CGAAGCCAGC CCCGGCGGGT TTGTCATGGA TTCGCGGCCA GGGCTTTACG ACTCGGTGCT GGTGCTGGAC TACAAGAGCC TGTACCCATC GATCATCCGT ACCTTTCTCA TCGACCCGGT CGGGCTGATC GAAGGCTTGC GCCAGCCTGA CGACGCACAT TCGGTCGAGG GTTTTCGCGG TGGGCGTTTT TCACGCACAC AGCACTGCCT GCCAGCCATC GTCGAACGGG TGTGGCAGGG CAGGGAAGCG GCCAAGCGCG AGGGCAATGC GCCGCTGTCA CAGGCCTTGA AAATCATTAT GAATGCCTTT TATGGCGTGC TTGGTTCCAG CGGTTGCCGT TTCTTCGACC CGCGCCTGGC GTCGTCGATC ACCATGCGCG GCCACCAGAT CATGCGCCAG ACCAGGTCCC TGATCGAGGC GTGTGGCTAC GATGTAATCT ACGGTGACAC CGACTCCACC TTTGTCTGGC TCAAGGGTGC CCACGCCGAG GAAGACGCGG CGCGCATCGG CCGCGAGCTG GTGGCAAAGG TCAACCAATG GTGGCAAGCC CATCTGCACG AGACCATGAA CCTGCAGAGC GCCCTCGAAC TGCAGTTCGA GGTGCATTAC CGACGCTTCC TGATGCCCAC CATCCGCGGT ACCGATGAAG GCAGCAAAAA GCGCTATGCC GGCCTGGTGC AGCGGGCCGA CGGTGCTGAA GAAATGGTTT ACAAGGGCCT GGAATCGGTG CGCACCGACT GGTCACCGCT GGCCCGGCAG TTCCAGCAGG AACTCTACGG CCGAGTGTTC CGCAGCGAGC CCTACCGTGA TTATGTCCGC GAGTACGTGC GGCGAACGTT GGCGGGCGAG CAGGACGAAC TGCTGGTTTA TCGCAAGCGC CTGCGTCGCC CGCTGGCCGA TTACCAGCGC AACGTGCCGC CGCATGTGCG TGCCGCACGC CTTGCCGACG ACTACAACAA GCGTCTGCAG CGCCCTCTGC AGTATCAGCG TGGGGGCTGG ATCAGCTACG TGATCACCAC CGCCGGGCCT GAGCCGCTGG AAAACCTGCA GGCACCGATC GACTACGATC ACTACATCAG CCGTCAGCTA CTGCCGGTGG CCGACGCCAT CCTGCCCTTT GTCGGCGATG ATTTCGCGCG CCTTACCGAC CATCAGTTAC TGCTGTTCTG A
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Protein sequence | MELQQGFVLT RHWHDTPEGT CVEFWLATDA GPRLLRLAAQ ESVAFIPQAQ AEHARVLLAN EAGTKLKPLR LKDFEHRPML GLYARQHRQL MQLEQRLRTA GIDVFEADIR PPERYLMERF ITAPVQFTGQ PDAQGVYRDA QLKPQPGYRP ALRLVSLDIE TSERGELYSI ALEGCGQRQV YMLGPANGDA TGLDFDLEYC ADRAALITRL NQWMAKHDPD AIIGWNLVQF DLRLLHEHAK SLQVPLALGR NGAVMTLRSH AGGGHVFADA PGRLLIDGIE ALRSATWSFA SFSLENVAQT LLGEGKAIDT PYQRMDEINR RFAEDKPALA RYNLKDCELV TRIFAHTRLL DFLLERASVT GLAVDRSGGS VAAFCHLYIP QMHRLGFVAP SLGSRPDEAS PGGFVMDSRP GLYDSVLVLD YKSLYPSIIR TFLIDPVGLI EGLRQPDDAH SVEGFRGGRF SRTQHCLPAI VERVWQGREA AKREGNAPLS QALKIIMNAF YGVLGSSGCR FFDPRLASSI TMRGHQIMRQ TRSLIEACGY DVIYGDTDST FVWLKGAHAE EDAARIGREL VAKVNQWWQA HLHETMNLQS ALELQFEVHY RRFLMPTIRG TDEGSKKRYA GLVQRADGAE EMVYKGLESV RTDWSPLARQ FQQELYGRVF RSEPYRDYVR EYVRRTLAGE QDELLVYRKR LRRPLADYQR NVPPHVRAAR LADDYNKRLQ RPLQYQRGGW ISYVITTAGP EPLENLQAPI DYDHYISRQL LPVADAILPF VGDDFARLTD HQLLLF
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