| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3287 |
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| Symbol | |
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| ID | 5195467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3698651 |
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| End bp | 3700045 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640587734 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001268597 |
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| Protein GI | 148548495 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.7008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCTGTA CCCAGCCGTG CAAAGCTGCC CCTGCAACGA ACTGCAGGGC GTCATTACAA
AATTGTAATC TTGCCGCCAC CGCCCCGATA ACCAGCCCTT TCTACAGTCC CTCGCCAATG
CTTCGCCCAG AGGACTGTTT CGTGCCCATC CCCCGCAAGA TCGCCTTGCT CTGTCTGCTG
CTGGCCAGTG CCACCGGCGC CCAGGCCAGC CAGGTGCTGA GCCTGCCCCA GGCGCTTACC
GCCGCTTTCG CCCAGAACCC GGAGCTGGCT GCAGCCGGCC GTGAAATTGG CATTGCCGAT
GGCGAACGGC GCCAGGCCGG GCTGCTCCCC AACCCGGAGC TGGCCTGGGA GGTCGAGGAC
ACCCGCCGCG ACACCAGCAC AACCACCGTC ACCCTCAGCC AGCCGCTGGA ACTGGGCGGG
AAGCGCGGCG CGCGTCTCGC CGTGGCGGGT GCCGGCCAGG CCATTGCCCA GCTTGACCTG
GAGCGCCAGC GCAACGCCCT GCGGGCCGAT GTGGTGCAGG CTTTCCACGC TGCCTTGCGT
GCACAGACCG CGCTGGAGTT GGCTCAGCAG TCGCAGGCGT TGACTGAACG AGGTCTGCGG
GTGGTGCAAG GGCGGGTTAC GGCAGGCCAG TCATCCCCGG TGGAGGCCAC CCGTGCCCAG
GTGCAACTGG CCCAGGCCCA GGCCGAAGTG CGCCGCGCGA AAACCCAGCG CAGCGTGGCC
TACCAGGCCT TGGCCCGGTT GACGGGCAGC CCGCTGGCAA GCTTCGACCG GTTGCAGGCA
GCCAACCTTT CGCCAGGCAT CGCGCCGGGT GCCGACACCT TGCTTGACCA GGTCGAAAAG
ACTGCCGAAT GGCGCCTGGC CGCTGCCCAG GTCGAGCGCG GCGACGCCTC CCTGGGGGCG
GAAAAAGCCC AGCGTATCCC CAACCTCACC GTCAGCCTTG GCAGCCAGTA CAGCCGCGAA
GACCGGGAGC GAGTGAACGT GGTTGGCCTG TCCATGCCGT TGCCGCTGTT CGACCGCAAC
CAAGGCAATG TTCTGGCAGC TGCGCGCCGC GCCGACCAGG CGCGCGACCT GCGCAATGCC
GTGGCGCTGC GTCTGCGCAG TGAAACCCGT AGTGCCATCA GCCAGTGGGA GGCGGCGATG
CAGGACGTTG AAGCCTATGA CCGCACCATC CTGCCGGCTG CGCAGCAGGC CGTGGACACC
GCCACCCGCG GTTTTGAAAT GGGCAAGTTC GCTTTCCTCG ATGTACTCGA CGCCCAGCGC
ACGCTGATCG AGGCTCGCGG GCTGTACCTC GAGGCGCTGG CCTCGGCGAC CGACGCGCGT
GCACAAGTGG AGCGGATCTA CGGCGATCTC GATGGCGTGA GCAACAAATC CAATAGCAGG
AGCAACAATG ACTAA
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| Protein sequence | MPCTQPCKAA PATNCRASLQ NCNLAATAPI TSPFYSPSPM LRPEDCFVPI PRKIALLCLL
LASATGAQAS QVLSLPQALT AAFAQNPELA AAGREIGIAD GERRQAGLLP NPELAWEVED
TRRDTSTTTV TLSQPLELGG KRGARLAVAG AGQAIAQLDL ERQRNALRAD VVQAFHAALR
AQTALELAQQ SQALTERGLR VVQGRVTAGQ SSPVEATRAQ VQLAQAQAEV RRAKTQRSVA
YQALARLTGS PLASFDRLQA ANLSPGIAPG ADTLLDQVEK TAEWRLAAAQ VERGDASLGA
EKAQRIPNLT VSLGSQYSRE DRERVNVVGL SMPLPLFDRN QGNVLAAARR ADQARDLRNA
VALRLRSETR SAISQWEAAM QDVEAYDRTI LPAAQQAVDT ATRGFEMGKF AFLDVLDAQR
TLIEARGLYL EALASATDAR AQVERIYGDL DGVSNKSNSR SNND
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