| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3248 |
|---|
| Symbol | |
|---|
| ID | 5192362 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3657814 |
|---|
| End bp | 3658566 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640587695 |
|---|
| Product | integral membrane protein TerC |
|---|
| Protein accession | YP_001268558 |
|---|
| Protein GI | 148548456 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0861] Membrane protein TerC, possibly involved in tellurium resistance |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.152861 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATATT TGCTGGAACT CGCCGCTAGC CCTACCGCCT GGGTTGCCCT GGCTACGCTG
GTGGCCATGG AAGTTGTACT GGGCATCGAC AACCTGATCT TCATCTCGAT CCTGACCAAC
AAACTGCCGG TGGAGTACCG CTCCAAGGCG CGGCGTATCG GTATCAGCAT GGCCTTGGTC
ATGCGGCTGG CCTTGCTCAG CACCGTGGCC TGGATCGTCC AGTTGACCGA CCCGGTGTTC
GAAGTGTTCG GCAACGCCTT CTCGTGGAAG GATGTGATTC TGATTGCCGG TGGTTTGTTC
TTGCTGTGGA AGGCGACCAA GGAAATTCAC GAAAACGTCG ACCCGCATGG CGCCAAGGAG
GAAGCCAAAG TCTCCTCCAC GGTTACCCTG GGCTTTGCTG CGGCGATCTT CCAGATCCTG
CTGCTGGACA TCGTCTTCTC GGTCGACAGC ATCATCACCG CCGTGGGCAT GACCGAGCAC
CTGCCCATCA TGATTATCGC CGTTATCACG GCTGTGATCG TGATGATGGT GGCCGCCGAC
CCGCTGGCCA ACTTTATCAA CGACAACCCG ACCGTGGTCA TGCTGGCGCT GGGCTTCCTC
ATCATGATCG GCATGACGCT GATCGCCGAA GGCTTTGGCG CCCATGTACC CAAGGGCTAT
GTGTATGCGG CCATGGCGTT CTCGACGGCT ATCGAGGTCC TCAACATCCT GGCCCGCCGA
GCGCGTCTGA AGCGTGAGGC GGCTGAAGGT TGA
|
|---|
| Protein sequence | MEYLLELAAS PTAWVALATL VAMEVVLGID NLIFISILTN KLPVEYRSKA RRIGISMALV
MRLALLSTVA WIVQLTDPVF EVFGNAFSWK DVILIAGGLF LLWKATKEIH ENVDPHGAKE
EAKVSSTVTL GFAAAIFQIL LLDIVFSVDS IITAVGMTEH LPIMIIAVIT AVIVMMVAAD
PLANFINDNP TVVMLALGFL IMIGMTLIAE GFGAHVPKGY VYAAMAFSTA IEVLNILARR
ARLKREAAEG
|
|---|
| |