Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3244 |
Symbol | |
ID | 5190654 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3653985 |
End bp | 3654554 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640587689 |
Product | sporulation domain-containing protein |
Protein accession | YP_001268554 |
Protein GI | 148548452 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.278143 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.879472 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGCGCAAAC TGGCTGTGGT AATGGCAGTG CTCGCCCTGG CGGGCTGTGA GAACGAGGTC GAAGGCGTGC ACAAGCAGGT GGCCGAACAC CTGCACAACC CCAAGACTGC CAAGTTCGGC AACGTGCGGA TCGACACCCA GGGCACCATC TGCGGTCAGG TCCGCGGCAA GGACGATGCC GGGCAGTACG AAGCCTACCG CAGCTACGTG GCGATCAAGC GCGATGGCCA GTACGACATC ATCGTTGACG AAACCGGCAA CAACCTGCGT ATCCGTGAGC TCTGCGGCGG AGCCGACCTG CAGCGCCGTG CTGAGGCGCT GGCAGACCAG CCGGCGCCCC AGGGGTGGGA TGTGGAAGTG GTACAGGGCG CCAACATGGG CGCACTCAGC GATATGACGG CGCGCCTGAT CGAAAAGGGC ATCCCGTCTT CGGTGGAGTA CCGTGACGGC AAGCCGGTGG TGCTGATGGG GCCGTTCCCC ACCCGCGAAG AAGCGCAAGC GCGCAGGGAT GAAGTGATGG CCAAGCTTGG TACCGATTCG GTGGTCATCC AGCACGGCGC AGCACGCTAG
|
Protein sequence | MRKLAVVMAV LALAGCENEV EGVHKQVAEH LHNPKTAKFG NVRIDTQGTI CGQVRGKDDA GQYEAYRSYV AIKRDGQYDI IVDETGNNLR IRELCGGADL QRRAEALADQ PAPQGWDVEV VQGANMGALS DMTARLIEKG IPSSVEYRDG KPVVLMGPFP TREEAQARRD EVMAKLGTDS VVIQHGAAR
|
| |