| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3219 |
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| Symbol | ihfA |
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| ID | 5195092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3631338 |
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| End bp | 3631640 |
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| Gene Length | 303 bp |
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| Protein Length | 100 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640587664 |
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| Product | integration host factor subunit alpha |
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| Protein accession | YP_001268529 |
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| Protein GI | 148548427 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0776] Bacterial nucleoid DNA-binding protein |
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| TIGRFAM ID | [TIGR00987] integration host factor, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.327028 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTGCTC TGACGAAAGC TGAGATGGCC GAAAGGCTGT ACGAGGAGCT GGGGCTTAAC
AAGCGTGAGG CCAAGGAGCT GGTCGAGCTG TTTTTCGAAG AAATTCGGCA CGCACTTGAA
GAGAACGAGC AGGTCAAGCT GTCCGGTTTC GGCAACTTCG ACCTTCGCGA CAAACGCCAG
CGGCCGGGCC GCAACCCCAA GACAGGGGAA GAAATCCCGA TCACCGCACG GCGCGTCGTC
ACCTTTCGTC CAGGGCAGAA GTTGAAGGCC CGGGTTGAGG CCTATGCTGG AACCAAGCCA
TAA
|
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| Protein sequence | MGALTKAEMA ERLYEELGLN KREAKELVEL FFEEIRHALE ENEQVKLSGF GNFDLRDKRQ
RPGRNPKTGE EIPITARRVV TFRPGQKLKA RVEAYAGTKP
|
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