Gene Pput_3108 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3108 
Symbol 
ID5194363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3495855 
End bp3496436 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content60% 
IMG OID640587554 
Producthypothetical protein 
Protein accessionYP_001268420 
Protein GI148548318 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCCA TTCGTACTCT CGCTCGTGCT GTAGCCCTTG CCACGCTGGC CTCTGCTGCC 
AGCTTCACGG TACAGGCTGC CGGTATCCCC ATCGGGAGCG AGGCGCTGGA AAGCCATGTC
ACCACACAGG TAACGGCTAT CGACCTGGCC ACCCGCCAAG TCACGGTGAA AGGCCCTGAC
GAGAAGAAGG ATGTGACGTT CCAGCTGACC GAAAAGGCCA AAGCGCTGCC CAACCTGAAA
GTCGGTGACC AAGTCGACAT CTACGTGACA CGCGCCGTGG CCTATGTGCT CAATCCGGAA
GTGGGTGGGG CGCCGAAAGC GACTGAAGAG TCCGGTACCA TTCGTGCAAC CGAGCAAAAC
CCCAACCCGG GCGGCGAGGC GTTCCGCCAG GTCAAGGTTA CCTCTCAGAT CAAGAAGATC
GACCTCAAGA CGCATGAGGT GAGCTTGTTG CCACCGGAGG GCAAGCTGCA GGTGGTCAAG
GTCGAGAACC CAGACCTGCA GAAACGCATG AAGAACCTCA AGGTTGGCCA GACGGTTGAC
GCGATCTACA CCGAAGTGCT GCGCGTCGAA ACCTCGCGCT GA
 
Protein sequence
MNPIRTLARA VALATLASAA SFTVQAAGIP IGSEALESHV TTQVTAIDLA TRQVTVKGPD 
EKKDVTFQLT EKAKALPNLK VGDQVDIYVT RAVAYVLNPE VGGAPKATEE SGTIRATEQN
PNPGGEAFRQ VKVTSQIKKI DLKTHEVSLL PPEGKLQVVK VENPDLQKRM KNLKVGQTVD
AIYTEVLRVE TSR