| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3098 |
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| Symbol | |
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| ID | 5191163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3485389 |
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| End bp | 3486300 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587544 |
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| Product | 5-dehydro-4-deoxyglucarate dehydratase |
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| Protein accession | YP_001268410 |
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| Protein GI | 148548308 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR03249] 5-dehydro-4-deoxyglucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCCAC AAGAACTTAA ATCCATCCTC TCCCACGGCC TGCTGTCTTT CCCGGTCACC
GACTTCAATG CCCAGGGCGA CTTCAACCCG GCTGGCTACA TCAAGCGCCT TGAGTGGCTG
GCCCCCTACG GCGCCAGCGC GCTGTTCGCC GCTGGCGGTA CCGGTGAATT CTTCTCCCTG
GCCGCCAGCG AATACAGCCA GGTGATCAAG ACCGCGGTCG ACACCTGCGC CACTTCGGTG
CCGATCCTCG CCGGTGTCGG TGGCTCCACC CGTCAGGCCA TCGAATACGC TCAGGAAGCC
GAGCGCCTGG GTGCCAAGGG CCTGCTGTTG CTGCCGCACT ACCTGACCGA AGCCAGCCAG
GACGGCGTCG CCGCCCACGT CGAAGCGGTG TGCAAATCGG TAAACATCGG TGTGGTGGTG
TACAACCGCA ACGTCTGCCG CCTGAACGCC GACCTGCTGG AAAAACTGGC CGAGCGCTGC
CCGAACCTGA TCGGCTACAA GGACGGCCTG GGTGATATCG AACTGATGGT GTCGATCCGT
CGTCGCCTGG GCGAGCGCTT CAGCTACCTG GGTGGCCTGC CGACCGCCGA AGTGTATGCT
GCCGCCTACA AAGCCCTGGG CGTACCGGTT TACTCCTCCG CGGTGTTCAA CTTCGTGCCG
AAAACCGCCA TGGACTTCTA CAACGCCATC GCCCGTGACG ACCACGCCGC CGTGGCCAAG
CTGATCGACG ATTTCTTCCT GCCCTACCTG GACATCCGCA ACCGCAAGGC CGGCTACGCC
GTGAGCATCG TCAAGGCCGG CGCCAGAATT GCCGGTTACG ACGCTGGCCC GGTGCGCACT
CCGCTGACCG ACCTCACCGC CGAAGAGTAC GAAATGCTCG CCGCGCTGAT GGACAAGATG
GGCCCGCAGT AA
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| Protein sequence | MNPQELKSIL SHGLLSFPVT DFNAQGDFNP AGYIKRLEWL APYGASALFA AGGTGEFFSL
AASEYSQVIK TAVDTCATSV PILAGVGGST RQAIEYAQEA ERLGAKGLLL LPHYLTEASQ
DGVAAHVEAV CKSVNIGVVV YNRNVCRLNA DLLEKLAERC PNLIGYKDGL GDIELMVSIR
RRLGERFSYL GGLPTAEVYA AAYKALGVPV YSSAVFNFVP KTAMDFYNAI ARDDHAAVAK
LIDDFFLPYL DIRNRKAGYA VSIVKAGARI AGYDAGPVRT PLTDLTAEEY EMLAALMDKM
GPQ
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