Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3084 |
Symbol | |
ID | 5191133 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3469780 |
End bp | 3471567 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640587530 |
Product | Pyrrolo-quinoline quinone |
Protein accession | YP_001268396 |
Protein GI | 148548294 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4993] Glucose dehydrogenase |
TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGAT CCCCACGTCG CCCCTTGTTC GCCGTGAGCC TGGTGCTCAG CGCCATGCTG CTTGCCGGCG CGGCTCACGC CGCTGTCAGC AATGAAGAAA TCCTCCAGGA CCCGAAGAAC CCGCAGCAGA TCGTGACCAA TGGCCTGGGC GTCCAGGGCC AGCGCTACAG CCCGCTGGAT CTGCTCAACG TCAATAACGT CAAGGAGCTG CGCCCGGTCT GGGCGTTCTC CTTCGGCGGG GAGAAGCAGC GCGGCCAGCA GGCCCAGCCG CTGATCAAGG ACGGGGTGAT GTACCTGACC GGCTCCTACT CGCGGGTGTT CGCCGTGGAC GCCCGCACCG GCAAGAAACT GTGGCAATAC GATGCACGTC TGCCGGATGA CATCCGCCCC TGCTGCGACG TGATCAACCG CGGCGTCGCA CTGTACGGCA ACCTGGTGTT CTTCGGCACG CTGGACGCCA AGCTGGTGGC CCTGAACAAG GACACCGGCA AGGTGGTCTG GAGCAAGAAG GTTGCCGACC ACAAAGAAGG CTACTCCATC AGTGCCGCGC CGATGATCGT CAATGGCAAG CTGATTACCG GCGTTGCCGG CGGCGAGTTC GGCGTGGTGG GCAAGATCCA GGCGTACAAC CCGGAGAACG GCGAGCTGCT GTGGATGCGC CCCACCGTGG AAGGGCACAT GGGCTATGTG TACAAGGACG GCAAGGCGAT CGAGAACGGT ATTTCCGGCG GTGAGGCGGG CAAGACCTGG CCTGGCGACC TGTGGAAGAC CGGCGGCGCC GCGCCGTGGC TGGGCGGTTA CTACGACCCG GAAACCAACC TGATCCTGTT TGGTACCGGT AACCCGGCCC CGTGGAACTC GCACCTGCGC CCCGGTGACA ACCTGTACTC CTCCTCACGC CTGGCACTGA ACCCGGACGA CGGCACCATC AAGTGGCACT TCCAGAGCAC GCCGCATGAC GGCTGGGACT TCGACGGCGT GAACGAACTG ATCTCGTTCA ACTACAAGGA CGGCGGCAAG GAGATCAAGG CTGCCGCCAC GGCCGACCGC AACGGTTTCT TCTACGTGCT CGATCGCACC AACGGCAAGT TCATCCGCGG CTTCCCGTTC GTTGACAAGA TCACCTGGGC CACGGGCCTG GACAAGGACG GCCGGCCGAT CTACAACGAC GCCAGCCGCC CGGGCGCACC CGGCAGCGAG GCCAAGGGCA GCTCGGTGTT CGTCGCGCCG GCCTTCCTCG GCGCCAAGAA CTGGATGCCG ATGGCCTACA ACAAGGACAC AGGGCTGTTC TACGTGCCGT CCAACGAGTG GGGCATGGAC ATCTGGAACG AAGGCATCGC CTACAAGAAA GGTGCGGCGT TCCTCGGCGC CGGCTTCACC ATCAAGCCGC TCAATGAAGA CTACATCGGC GTGCTGCGCG CCATCGACCC GATCAGCGGC AAGGAAGTGT GGCGCCACAA GAACTACGCG CCGCTGTGGG GCGGTGTGCT GACCACCAAG GGCAATCTGG TGTTCACGGG CACGCCAGAG GGCTTCCTGC AGGCATTCAA CGCCAAGACC GGCGACAAGG TCTGGGAATT CCAGACCGGC TCAGGCGTGC TTGGCTCGCC CGTCACCTGG GAAATGGACG GCGAGCAATA CGTCTCGGTG GTCTCCGGCT GGGGCGGCGC GGTGCCGCTG TGGGGCGGCG AAGTGGCCAA ACGGGTCAAG GACTTCAACC AGGGCGGCAT GCTCTGGACC TTCAAGTTGC CCAAGCAGTT GCAGCAAACG GCAAGCGCCA AGCCATAA
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Protein sequence | MTRSPRRPLF AVSLVLSAML LAGAAHAAVS NEEILQDPKN PQQIVTNGLG VQGQRYSPLD LLNVNNVKEL RPVWAFSFGG EKQRGQQAQP LIKDGVMYLT GSYSRVFAVD ARTGKKLWQY DARLPDDIRP CCDVINRGVA LYGNLVFFGT LDAKLVALNK DTGKVVWSKK VADHKEGYSI SAAPMIVNGK LITGVAGGEF GVVGKIQAYN PENGELLWMR PTVEGHMGYV YKDGKAIENG ISGGEAGKTW PGDLWKTGGA APWLGGYYDP ETNLILFGTG NPAPWNSHLR PGDNLYSSSR LALNPDDGTI KWHFQSTPHD GWDFDGVNEL ISFNYKDGGK EIKAAATADR NGFFYVLDRT NGKFIRGFPF VDKITWATGL DKDGRPIYND ASRPGAPGSE AKGSSVFVAP AFLGAKNWMP MAYNKDTGLF YVPSNEWGMD IWNEGIAYKK GAAFLGAGFT IKPLNEDYIG VLRAIDPISG KEVWRHKNYA PLWGGVLTTK GNLVFTGTPE GFLQAFNAKT GDKVWEFQTG SGVLGSPVTW EMDGEQYVSV VSGWGGAVPL WGGEVAKRVK DFNQGGMLWT FKLPKQLQQT ASAKP
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