Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2971 |
Symbol | |
ID | 5190389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3358296 |
End bp | 3359060 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640587417 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001268283 |
Protein GI | 148548181 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCAGG TACGCACGAT TGTGATTACC GGCGCGGCCA ATGGTATTGG CCGCGCCGTC GCGGAAAGTT TTGCAGCCCA GGCCGAGCAC CTTTTGATCT TGCTTGATCG GGATCTGGCA ACCTTGCAGA GCTGGGTCAC CGAGGGCGAA TTTGCCGCCC GCATCGAAAC CCATCAAGCG AACATCGCCG ATCTCGCCAG CCTGCAACTT CTGTTCAAGG GCCTGGCCGA CCGGGTCGGC TTTGTCGATG TGCTGGTCAA CAGCGCCGGG GTCTGCGACG AGAACGAACC CGAAGACCTC GACAACTGGC ACAAGGTCAT TTCGATCAAC CTCAACGGCA CCTTTTACGT CACCTCGTTG TGCCTGCCAC TGATGGCGGA GGGTGGGCGG ATCGTCAACA TGTCGTCGAT CCTCGGCCGA GCGGGCAAGG TCCGCAACAC CGCTTACTGC GCCTCCAAGC ACGGCATCAT CGGCATGACC AAAGCCTTGG CGCTGGACCT GGCGCCACGG CGAATCACCG TCAATGCCAT CCTGCCCGCC TGGATCGACA CACCGATGTT GCAAGGCGAA TTGGCGGCTC AAGCGCGCAT CGCCGGGATC AGCCACGAGC AAATCCTGCG CAATGCCAAG AAGAAGTTGC CGCTGCGGCG CTTCATTCAG GGCGACGAAG TGGCGGCCAT GGTTCGTTAT CTGGCGAGCC CGCAGGCGAG TGGTGTCACG GCGCAAAGCC TGATGATCGA CGGCGGTGCC GGGTTGGGAA TGTAG
|
Protein sequence | MSQVRTIVIT GAANGIGRAV AESFAAQAEH LLILLDRDLA TLQSWVTEGE FAARIETHQA NIADLASLQL LFKGLADRVG FVDVLVNSAG VCDENEPEDL DNWHKVISIN LNGTFYVTSL CLPLMAEGGR IVNMSSILGR AGKVRNTAYC ASKHGIIGMT KALALDLAPR RITVNAILPA WIDTPMLQGE LAAQARIAGI SHEQILRNAK KKLPLRRFIQ GDEVAAMVRY LASPQASGVT AQSLMIDGGA GLGM
|
| |