| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2895 |
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| Symbol | |
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| ID | 5191657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3284343 |
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| End bp | 3285122 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587343 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001268209 |
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| Protein GI | 148548107 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.405915 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACGC TGAGCAGAAA CGCCTTGCCC TTGGAGGGAC AGGTCGCAGT AGTTACGGGC
GGAGCCCACG GTATCGGTCT GGGGATCGTC GAGCGGCTGC TGGGGTTGGG GGCCCGGGTC
ACCGCCTCGG ATATCGATGA GTCGGGCCTC TCGTTGCTTT GCGAGCGTCT GGCCGCCAAG
CATGCGGACG CTATAGCGGT GCATGCCGCC GATCTCTCTG AAGAGCAAGG TGCCCAGGGA
CTGCACCGGG CTGCGGTCGA GCGCTTCGGT TCGGTACAGA TACTGGTGAA CTGCGCGGGG
GGCGGTGTGA TCCGGCCTTT CCTGGAGCAT ACACCCGAGA CCTTGAAGGC CACCATCGAT
CGTAACCTGT GGACTGCGTT GTGGTGCAGC CGGGTATTCC TGCCGGACAT GCTTGCTCGG
CAGTACGGTC GGATCATCAA CATCGGCGCC GACTCGGTAC GCAACGGTCT GCCGGACCAT
GCGGCCTACA ACGCAGCCAA GGGCGGTATG CACGGACTGA CCACCGGCCT GGCGCGCGAG
TTCGCCCGCC AGGGCGTTAC GGTGAACACG GTTGCGCCGT GCGCGGTGAA CACCGAAGTG
TGGGTCAGAA TCAAGAACGC CAACCCCGAG CTCGCCCAGC GATTTCTGGA TGTCATTCCG
ATGGGCCGGG TGGGCGAGAT CGAAGAGGTT GCGTCGATGG TTGGCTACCT GGCTCAGCCG
GAGGCGGCCT TCGTCACCGG TCAGGTAATC AGCGTCAACG GCGGCAGCAC AATGCTGTGA
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| Protein sequence | MSTLSRNALP LEGQVAVVTG GAHGIGLGIV ERLLGLGARV TASDIDESGL SLLCERLAAK
HADAIAVHAA DLSEEQGAQG LHRAAVERFG SVQILVNCAG GGVIRPFLEH TPETLKATID
RNLWTALWCS RVFLPDMLAR QYGRIINIGA DSVRNGLPDH AAYNAAKGGM HGLTTGLARE
FARQGVTVNT VAPCAVNTEV WVRIKNANPE LAQRFLDVIP MGRVGEIEEV ASMVGYLAQP
EAAFVTGQVI SVNGGSTML
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