Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2882 |
Symbol | |
ID | 5195342 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3273186 |
End bp | 3274016 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640587331 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001268197 |
Protein GI | 148548095 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.035123 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGAATG TAAACGCAGA GATCGGCCGC ATGGTGCTGG CTGGTGGAAT CGAGACCAAT CTCCATGATG TTGGCGCCGG CAACCCTGTG GTACTCGTTC ATGGTTCAGG CCCAGGTGTG ACCGCCTGGG CGAACTGGAG GACGGTCATG CCTGAGTTAT CCAGGCATCG CCGCGTCATT GCGCCGGACA TGGTGGGCTT CGGTTTCACA CAGCGGCCGC ACGGGATTCA CTACGGCGTC GAGTCCTGGG TTGCACATCT GGCTGGGATC CTTGATGCCC TGGAACTCGA CCGTGTCGAT CTCGTGGGGA ATTCGTTCGG CGGTGCCTTG TCTCTGGCCT TTGCTATCCG ATTTCCGCAT CGGGTTCGCC GCCTGGTGCT GATGGGTGCC GTTGGCGTGA GCTTCGAGCT CACGGATGGA CTGGATGCAG TTTGGGGTTA TGAGCCGTCC GTGCCGAACA TGCGCAAGGT CATGGACTAC TTCGCCTACG ACCGAAGTCT CGTTTCCGAC GAACTGGCGG AACTGCGCTA CAAGGCGAGC ACCCGGCCCG GTTTTCAGGA GGCCTTCGCT TCCATGTTCC CTGCTCCGCG GCAGCGCTGG GTAGATGCGC TGGCCAGTTC CGATCAGGAC ATCCGGGACA TCCGGCATGA AACGCTGATC CTGCATGGCC GCGACGATCG CGTGATTCCC CTCGAAACCT CGTTGCGGCT GAACCAGCTG ATCGAACCCT CCCAGTTACA TGTCTTTGGC AGGTGTGGCC ATTGGGTGCA GATCGAGCAA AACCGGGGCT TTATCCGCTT GGTCAACGAT TTTCTTGCCG CGGAGGACTG A
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Protein sequence | MTNVNAEIGR MVLAGGIETN LHDVGAGNPV VLVHGSGPGV TAWANWRTVM PELSRHRRVI APDMVGFGFT QRPHGIHYGV ESWVAHLAGI LDALELDRVD LVGNSFGGAL SLAFAIRFPH RVRRLVLMGA VGVSFELTDG LDAVWGYEPS VPNMRKVMDY FAYDRSLVSD ELAELRYKAS TRPGFQEAFA SMFPAPRQRW VDALASSDQD IRDIRHETLI LHGRDDRVIP LETSLRLNQL IEPSQLHVFG RCGHWVQIEQ NRGFIRLVND FLAAED
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