Gene Pput_2882 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2882 
Symbol 
ID5195342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3273186 
End bp3274016 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content60% 
IMG OID640587331 
Productalpha/beta hydrolase fold 
Protein accessionYP_001268197 
Protein GI148548095 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.035123 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATG TAAACGCAGA GATCGGCCGC ATGGTGCTGG CTGGTGGAAT CGAGACCAAT 
CTCCATGATG TTGGCGCCGG CAACCCTGTG GTACTCGTTC ATGGTTCAGG CCCAGGTGTG
ACCGCCTGGG CGAACTGGAG GACGGTCATG CCTGAGTTAT CCAGGCATCG CCGCGTCATT
GCGCCGGACA TGGTGGGCTT CGGTTTCACA CAGCGGCCGC ACGGGATTCA CTACGGCGTC
GAGTCCTGGG TTGCACATCT GGCTGGGATC CTTGATGCCC TGGAACTCGA CCGTGTCGAT
CTCGTGGGGA ATTCGTTCGG CGGTGCCTTG TCTCTGGCCT TTGCTATCCG ATTTCCGCAT
CGGGTTCGCC GCCTGGTGCT GATGGGTGCC GTTGGCGTGA GCTTCGAGCT CACGGATGGA
CTGGATGCAG TTTGGGGTTA TGAGCCGTCC GTGCCGAACA TGCGCAAGGT CATGGACTAC
TTCGCCTACG ACCGAAGTCT CGTTTCCGAC GAACTGGCGG AACTGCGCTA CAAGGCGAGC
ACCCGGCCCG GTTTTCAGGA GGCCTTCGCT TCCATGTTCC CTGCTCCGCG GCAGCGCTGG
GTAGATGCGC TGGCCAGTTC CGATCAGGAC ATCCGGGACA TCCGGCATGA AACGCTGATC
CTGCATGGCC GCGACGATCG CGTGATTCCC CTCGAAACCT CGTTGCGGCT GAACCAGCTG
ATCGAACCCT CCCAGTTACA TGTCTTTGGC AGGTGTGGCC ATTGGGTGCA GATCGAGCAA
AACCGGGGCT TTATCCGCTT GGTCAACGAT TTTCTTGCCG CGGAGGACTG A
 
Protein sequence
MTNVNAEIGR MVLAGGIETN LHDVGAGNPV VLVHGSGPGV TAWANWRTVM PELSRHRRVI 
APDMVGFGFT QRPHGIHYGV ESWVAHLAGI LDALELDRVD LVGNSFGGAL SLAFAIRFPH
RVRRLVLMGA VGVSFELTDG LDAVWGYEPS VPNMRKVMDY FAYDRSLVSD ELAELRYKAS
TRPGFQEAFA SMFPAPRQRW VDALASSDQD IRDIRHETLI LHGRDDRVIP LETSLRLNQL
IEPSQLHVFG RCGHWVQIEQ NRGFIRLVND FLAAED