Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2880 |
Symbol | |
ID | 5195398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3271063 |
End bp | 3271626 |
Gene Length | 564 bp |
Protein Length | 187 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640587329 |
Product | toluene dioxygenase |
Protein accession | YP_001268195 |
Protein GI | 148548093 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG5517] Small subunit of phenylpropionate dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.427188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0581646 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGATT CAGCCAACAG AGCCGACGTC TTTCTCCGCA AGCCGGCACC CGTAGCGCCC GAACTGCAGC ACGAAGTCGA GCAGTTCTAC TATTGGGAGG CCAAGCTTCT CAACGATCGC CGCTTCGAGG AGTGGTTCGC GCTGCTCGCG GAAGACATTC ACTACTTCAT GCCCATTCGC ACCACGCGGA TCATGCGGGA CTCGCGCCTT GAATACTCAG GCTCCCGAGA GTACGCGCAC TTCGATGACG ACGCCACGAT GATGAAGGGA CGCTTGCGCA AGATCACGTC CGACGTGAGC TGGTCCGAGA ACCCCGCATC GCGGACCCGG CATCTCGTGA GCAACGTGAT GATCGTCGGC GCAGAGGCAG AAGGGGAGTA CGAAATCTCA AGCGCCTTCA TTGTGTACCG CAATCGTCTG GAGCGGCAGC TCGACATCTT TGCCGGTGAG CGTCGCGATA CGTTGCGCCG TAACACGAGC GAGGCCGGGT TCGAGATCGT CAATCGGACC ATCCTGATCG ACCAGAGCAC CATCCTGGCC AATAACCTCA GTTTCTTCTT CTAG
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Protein sequence | MIDSANRADV FLRKPAPVAP ELQHEVEQFY YWEAKLLNDR RFEEWFALLA EDIHYFMPIR TTRIMRDSRL EYSGSREYAH FDDDATMMKG RLRKITSDVS WSENPASRTR HLVSNVMIVG AEAEGEYEIS SAFIVYRNRL ERQLDIFAGE RRDTLRRNTS EAGFEIVNRT ILIDQSTILA NNLSFFF
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