Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2869 |
Symbol | |
ID | 5194760 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3259135 |
End bp | 3260577 |
Gene Length | 1443 bp |
Protein Length | 480 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640587318 |
Product | RND efflux system outer membrane lipoprotein |
Protein accession | YP_001268184 |
Protein GI | 148548082 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.451085 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.401715 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGACTC ACTATCTTTC GATCGCACTG AGCGTAGCGC TAAGCGGCTG TAGTCTCATC CCTGACTACC AGCGCCCGCC TGCCCCCATC CAAGCCGGCT GGCCCCAGGG CGAAGCCTAC GCCAAGCTCA AGGCAGGTAC TCATCGTCCC TCTCAGACGC GCGATGCAGA GCTGAATTGG CAAGTATTCT TTCGCGATCC AGTCATGCGC GAACTGATCG CCACAGCCCT GAACAACAAC CGTGACCTGC GCCAGACCGC ACTCAACGTC GAGGCCTACC GCGCCCTGCA CAGGATCGAG CGGTCTGCTC TGCTCCCGAG GGCCAATACC GGTGTTGGCG CTACGCGCCA GCGCTTGCCC GCCGATCTAT CCCCCACAGG TGAGGCCGGT ATCCAGAGTC AGTACGATAC GACGCTGAGC ATGTCCTACG AGCTGGATAT GTTCGGTCGC CTGCGCAGCC TTGAACGTGC GGCATTGCAA GAATACCTAG CCGCCGCCGA AACCCAGCGC AGCATGCAGA TCGCGTTGAT CGCAGATGTC GCCATCGCCT ATCTGAGCTG GCGCAGCGAC CAGGCTCAAC TCGATCTGGC GCGCTCGACG CTCGCCAGCT ACGAGAACAG CCTGAACCTG ATCAAGTCGA GTCGCGAGGT CGGTACTGCC TCGGCACTCG ATGTACGCCA GGCACGCAGC CTTGTGGAAA CCGCACGCGT GCAACAGACG CTGTATACCC GCCAGGTCGC GCAGGACATG AATGCCCTGC AATTGCTGCT CGGTACCAAG CTGCCGGCCG ACTTGCCAAT CAGCGACGTC CTCGACCAAC CGCTGGCCGC ACTCTCCACC GGCCTTCCGG CCGATCTGCT GTTGCACCGT CCAGACATCC GCGCTGCCGA ACACCGACTG CTAGCCGCCA ACGCCAATAT CGGCGCGGCG CGGGCGGCCT TTTTCCCTAG CATCACGCTG ACCGCAGCGG CTGGCACGGC CAGCCATGAA TTGGATGGTT TGTTCGAGGG AGGCTCGGGG CTGTGGGCCT TCATGCCGCG GATCAATCTG CCGATCTTCA CCGCAGGGCG CCTGCGCGGC AACCTCGACT ACCGCAATGT CATCAAGGAC ATCAACGTAG CCGAGTACGA GAAAAGCATC CAGACCGCCT TCCGCGAGGT AGCCGATGGC CTGGCAGCGC GCGGCACTTT TGGCGAACAA CTGCAGGCCC AGCGCGACTT GGTCGATAAC AACCAAGCTT ACTACAAATT GGCCTATCAA CGCTACGACG AGGGCGTGGA CAATTATCTG GCGGTGCTCG ATGCACAGCG TGAGCTGTTC GCCGCACAAC AACAGTTCCT TTCGGACCGC CTCAATCAGC TCAGCAGCGA GGTGAGACTG TTCAAGGCCC TGGGTGGTGG CTGGGATAAC ATTTCCTCCC AGCCACTTAC CGCTCAGAAC TGA
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Protein sequence | MKTHYLSIAL SVALSGCSLI PDYQRPPAPI QAGWPQGEAY AKLKAGTHRP SQTRDAELNW QVFFRDPVMR ELIATALNNN RDLRQTALNV EAYRALHRIE RSALLPRANT GVGATRQRLP ADLSPTGEAG IQSQYDTTLS MSYELDMFGR LRSLERAALQ EYLAAAETQR SMQIALIADV AIAYLSWRSD QAQLDLARST LASYENSLNL IKSSREVGTA SALDVRQARS LVETARVQQT LYTRQVAQDM NALQLLLGTK LPADLPISDV LDQPLAALST GLPADLLLHR PDIRAAEHRL LAANANIGAA RAAFFPSITL TAAAGTASHE LDGLFEGGSG LWAFMPRINL PIFTAGRLRG NLDYRNVIKD INVAEYEKSI QTAFREVADG LAARGTFGEQ LQAQRDLVDN NQAYYKLAYQ RYDEGVDNYL AVLDAQRELF AAQQQFLSDR LNQLSSEVRL FKALGGGWDN ISSQPLTAQN
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