Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2733 |
Symbol | |
ID | 5191371 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3108295 |
End bp | 3109677 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640587185 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001268051 |
Protein GI | 148547949 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGG ACGGAACGCG AATTCGAACT GTCATGGGTG AAATCCAGTC GCGGATAGCC TCTCGAACCT ACACCCCGGG CGCGAGAATC CCCTCGGTCC GCGCGATGGC TCAGGCCATG CAAGTGTCGG TTTCTACGGT GCTTGAGGCC TATGAAAGGT TGATGGCAGA GGGTGTACTC AACTCTCGCC CTGGCTCCGG CTTTTACGTA GCCGGGCCAG TGGCACCCCT GGTGCTCACC GAACTCGGCC CAAGGCTTGA TCGTGAAGTG GACCCGCTGT GGATCTCGCG CCAGTCTCTA GACACCGCTA GCGATGCGTT GAAACCGGGG TGCGGGTGGC TACCGGCCTC CTGGATGTTC GAAGCCGGCT TGCGCAAGGC GCTTCGCACC GTTGCCCGTT CAGACACGTC GAAACTGACG GAGTACGCCT CGCCACTTGG GCATCTGCCG CTCAGGCAGT TCCTGTCACG CAAGCTGACA GGGATCGGGG TCGAAGCCCC TCTTGAACAG CTCATGCTCA CTGAGTCCGG CACTCACGCC ATCGACCTGG TCTGCCGTTT TCTGCTTGAG CCGGGGGACA CTGTGCTGGT CGACGACCCC TGCTATTTCA ATTTTCACGC ACTGCTGAAA GCGCACAGGG TGAACATCGT AGGCGTTCCC TACACCGCGA CGGGCCCGGA CATCGATGCA TTCGGCGCGG CCCTGCTCGC GCATTCTCCC CGGTTGTACA TAACCAATTC AGGCATCCAC AACCCGACCG GCGCTACCCT GTCTCCGGTC ACGGCACACA GGTTGCTGAA GCTGGCCGAC AACTCCAGCC TGGTGATTGT AGAGGACGAC ATCTTCGGGG ATTTCGAGAG TGCGCCAGCG CCACGGCTGT CTGCCTTCGA TGGCCTCTCT CGTGTCATCC AGATCGGTAG CTTTTCCAAG ACCATCTCCG CTTCGATTCG ATGCGGCTAC ATCGCGGCTC GCAGTGACTG GATCGAGAGC CTGGTCGATC TCAAGATTGC GACCACATTC GGGGGTGGCC GCCTGGCCGC GGACATCATC CATCTGGCGA TTACCGATAG CGGGTACCGG AAACACATGG AGAGTGTTCG CCTCAGGCTG GCCGAGGCTA TGGACAGAAC GGTAGCGAGG CTTCGGGCCA TTGGCATCAA GCCCTGGATA ACGCCCCAGT CAGGCATGTA CGTCTGGTGC CAACTCCCTC AAGGCAAGGA TGCAGCAACG CTGGCTCGGG CTTGCTTGAA TGAAGGTGTA GTGCTGGCGC CTGGTAATGC GTTCAGCCAG TCGATGGCTG CGGGTGATTT CCTCCGTTTC AACGTTGCCC AATCAGGTGA TGCCAAAATT TACGAAGTGT TGAAACGGGC GCTGAGTGCT TAG
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Protein sequence | MKRDGTRIRT VMGEIQSRIA SRTYTPGARI PSVRAMAQAM QVSVSTVLEA YERLMAEGVL NSRPGSGFYV AGPVAPLVLT ELGPRLDREV DPLWISRQSL DTASDALKPG CGWLPASWMF EAGLRKALRT VARSDTSKLT EYASPLGHLP LRQFLSRKLT GIGVEAPLEQ LMLTESGTHA IDLVCRFLLE PGDTVLVDDP CYFNFHALLK AHRVNIVGVP YTATGPDIDA FGAALLAHSP RLYITNSGIH NPTGATLSPV TAHRLLKLAD NSSLVIVEDD IFGDFESAPA PRLSAFDGLS RVIQIGSFSK TISASIRCGY IAARSDWIES LVDLKIATTF GGGRLAADII HLAITDSGYR KHMESVRLRL AEAMDRTVAR LRAIGIKPWI TPQSGMYVWC QLPQGKDAAT LARACLNEGV VLAPGNAFSQ SMAAGDFLRF NVAQSGDAKI YEVLKRALSA
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