Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2692 |
Symbol | |
ID | 5193898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3068495 |
End bp | 3069727 |
Gene Length | 1233 bp |
Protein Length | 410 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640587144 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_001268010 |
Protein GI | 148547908 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.514064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAGG CATTGCCATT GGCGGGTATC CGCGTCATTG ACTACAGCCA CTTCCTCGCC GGCCCCTATG TCGGCCGTTG CCTGGCGGCG CTCGGCGCAG AGGTGATCAA GGTCGAGCGG CCGGGTAGCG GCGACGCTGG CCGCCAGCAT GCGTTCACCC TGGACGACCA GCAGAGCGGC TATTTCCTGC AGCTGAACAT GGGCAAGCAG GGCGTCAGCG TCAACATGAA GGACCCGCGC GGCAAGGCGT TCATGCAGCG CCTGACCGAT TCGGCCGACG TGTTCATCGA GAACTACCGC CCCGGCGCCC TGGACAAGCT GGGCCTGGGC TACGCCGAGC TGTCGGCGCG CAACCCGCGC CTGGTGTACT GCTCGATTTC CGCCTACGGC CATACCGGGC CGGACGCCCA CCGCGCCGGC TTCGGCCTGA TCGCCGAGGC CAAGAGCGGG ATCATGCAGA TGGTGGGCGT GCCGGGCGAG GCACCGCCGC TGCTGCGTAT TTCCCTGGGC GACATGTACA CCGGCATCCA CGCGGTGGCG GCGATCAATG CCGCGCTGCT CGGCCGGGTG AGCAGTGGCC GAGGCCAGCA CATCGACATG GCGCTGTACG ACACCCTGGT GTCGATGCAC GAATACGCGG TGCAGTGTTA CACGCTGTCC GGTGGCACTG TGTTGCCCCA GCAGACCGGC CACGACATGC CCACTTCGAC CCTGTACGGC GTGTTCCGCG CCACCGACGG CGACCTGGTG ATCGCCGCCC AGGTCGACGA TGCCTGGCAG CGCTTCGCGG CCATGCTCGA AGCTAACGGC GGCCCGCCCG GGTTCGGCAG CGACCGCCGC TACCACAGCC TCAACGGCCG CAATGCCCAC CGCGAGGCGA TCCTGAGGGT GGTCCGCGAC TGGGTTGGCG CGCGTCGGGT GGCCGAGATC CTCGCGTTGC TCGATGGCAT CGACATCCCC AGTGCCAAGG TTCAACGCAT CGACGAAGTG CTGGCCGACC CGCAGATCCA GGCACGCAAC ATGGTCATTG AGCAGCAGCA CCCACGCTAC GGCACGCTGC GCCTGGCCAA CCTGCCGTTC CGCTTTTCCG ACTGCGACAC CACGATTCAC CAAGTAGCCC CGGACCTTGG CCAGCACAAC GCCGAAGTGG CCGCCGGGCT TGGCTTCAGC ACTGAAGAAA TCACAGCCCT GCAGGCGGAT GGCGTGTTGT TTACCCACGG AGATGCACGA TGA
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Protein sequence | MSQALPLAGI RVIDYSHFLA GPYVGRCLAA LGAEVIKVER PGSGDAGRQH AFTLDDQQSG YFLQLNMGKQ GVSVNMKDPR GKAFMQRLTD SADVFIENYR PGALDKLGLG YAELSARNPR LVYCSISAYG HTGPDAHRAG FGLIAEAKSG IMQMVGVPGE APPLLRISLG DMYTGIHAVA AINAALLGRV SSGRGQHIDM ALYDTLVSMH EYAVQCYTLS GGTVLPQQTG HDMPTSTLYG VFRATDGDLV IAAQVDDAWQ RFAAMLEANG GPPGFGSDRR YHSLNGRNAH REAILRVVRD WVGARRVAEI LALLDGIDIP SAKVQRIDEV LADPQIQARN MVIEQQHPRY GTLRLANLPF RFSDCDTTIH QVAPDLGQHN AEVAAGLGFS TEEITALQAD GVLFTHGDAR
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