| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2676 |
|---|
| Symbol | |
|---|
| ID | 5195351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3058078 |
|---|
| End bp | 3058926 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640587128 |
|---|
| Product | taurine dioxygenase |
|---|
| Protein accession | YP_001267994 |
|---|
| Protein GI | 148547892 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACATTG AACAACTGAC CTGCGCGATC GGTGCTGAGG TGAGTGGCGT CAACCTGGCC
GATGCGATTC ACGATGACGA ACTGTTCGCC CAGTTGCGCC AGCAGTTGCT CCAGCACCGT
GTGCTGTTCC TGCGCGACCA GCACTTCAGC CGTGCCGAGC ACGTGGCCTT CGCCCGTCGC
TTCGGCGAGC TGGAGGACCA CCCGGTGGCC GGGAGCGACC CGGAGCACCC GGGGCTGGTG
CAGATCTACA AGCGCCCGGA CCAGCCCAAC GACCGCTATG AAAATGCCTG GCACACCGAT
GCCACCTGGC GTGAGGCTCC GCCCATGGGG TGTGTGCTGC GCTGTGTGGA ATGCCCGCCG
GTAGGCGGCG ACACCTTGTG GGCGAACATG GTGCTGGCCT ATGAGAACCT GCCAAACGAT
GTAAAGGCCA GAATCGAAGA CCTGCGCGCC CGCCACAGCA TCGAGGCCAG CTTCGGCGCT
GCAATGCCGC TGGACAAACG GCTGGCACTC AAGGCGCAGT TCCCCGACGC CGAGCACCCG
GTCGTACGCA CCCACCCGGA AACGGGGGAG CAGGTGCTGT TCGTCAACGC CTTCACCACC
CACTTCAGCA ACTACCACAC CCCGCAGCGG GTGCGTTTCG GCCAGGATGC AAACCCGGGC
GCCGGCGACC TGCTGCGTTA CCTGATCAGC CAGGCCTACC TGCCCGAATA CCAGGTGCGC
TGGCGCTGGA AGCCCAACAG CGTGGCGATT TGGGACAACC GCAGCACCCA GCATTACGCC
GTCATGGACT ACCCGCCATG CCATCGCAAG ATGGAGCGTG CCGGGATCAA GGGCAGCCGC
ACGTTCTAA
|
|---|
| Protein sequence | MHIEQLTCAI GAEVSGVNLA DAIHDDELFA QLRQQLLQHR VLFLRDQHFS RAEHVAFARR
FGELEDHPVA GSDPEHPGLV QIYKRPDQPN DRYENAWHTD ATWREAPPMG CVLRCVECPP
VGGDTLWANM VLAYENLPND VKARIEDLRA RHSIEASFGA AMPLDKRLAL KAQFPDAEHP
VVRTHPETGE QVLFVNAFTT HFSNYHTPQR VRFGQDANPG AGDLLRYLIS QAYLPEYQVR
WRWKPNSVAI WDNRSTQHYA VMDYPPCHRK MERAGIKGSR TF
|
|---|
| |