Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2651 |
Symbol | |
ID | 5193657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3030398 |
End bp | 3031168 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640587103 |
Product | 3-hydroxybutyrate dehydrogenase |
Protein accession | YP_001267969 |
Protein GI | 148547867 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCCTTG AAGGCAAAAC TGCACTCGTC ACCGGTTCCA CCAGCGGCAT TGGCCTGGGC ATCGCCCAGG TATTGGCCCG GGCTGGCGCC AACATCGTGC TCAACGGCTT TGGTGACCCG GGCCCCGCCA TGGCGGAAAT GGCCCGGCAC GGGGTGAAGG TTGTGCATCA CCCGGCCGAC CTGTCGGATG TGATCCAGAT CGAGGCCTTG TTCAACCTGG CCGAACGTGA GTTCGGCGGC GTCGACATTC TGGTCAACAA CGCCGGTATC CAGCATGTGG CACCGGTTGA GCAGTTCCCG CCAGAAAGCT GGGACAAGAT CATCGCCCTG AACCTGTCGG CCGTATTCCA TGGCACACGC CTGGCGCTGC CGGGCATGCG CACGCGCAAC TGGGGGCGCA TCATCAATAT TGCTTCGGTG CATGGCCTGG TCGGCTCGAT GGGCAAGGCA GCCTACGTGG CAGCCAAGCA TGGTGTGGTC GGCCTGACCA AGGTGGTCGG CCTGGAAACC GCCACCAGTC ATGTCACCTG CAATGCCATT TGCCCGGGCT GGGTGCTGAC ACCGCTGGTG CAAAAGCAGA TCGACGATCG TGCGGCCCAG GGTGGCGATC GGCTGCAAGC GCAGCACGAT CTGCTGGCAG AAAAACAACC ATCGCTGGCC TTCGTCACCC CCGAACACCT CGGTGAGCTG GTACTCTTCC TGTGCAGCGA GGCCGGTAGC CAGGTTCGCG GCGCCGCCTG GAACGTCGAT GGTGGCTGGT TGGCCCAGTG A
|
Protein sequence | MTLEGKTALV TGSTSGIGLG IAQVLARAGA NIVLNGFGDP GPAMAEMARH GVKVVHHPAD LSDVIQIEAL FNLAEREFGG VDILVNNAGI QHVAPVEQFP PESWDKIIAL NLSAVFHGTR LALPGMRTRN WGRIINIASV HGLVGSMGKA AYVAAKHGVV GLTKVVGLET ATSHVTCNAI CPGWVLTPLV QKQIDDRAAQ GGDRLQAQHD LLAEKQPSLA FVTPEHLGEL VLFLCSEAGS QVRGAAWNVD GGWLAQ
|
| |