| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2627 |
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| Symbol | |
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| ID | 5195414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2996984 |
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| End bp | 2999581 |
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| Gene Length | 2598 bp |
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| Protein Length | 865 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640587079 |
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| Product | ATPase |
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| Protein accession | YP_001267945 |
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| Protein GI | 148547843 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCTGA AGTCTCTGTT CGCCAAGCTC AACGAAACCA GCCGCACGGC CACCGAAAGC
GCGGCGGCCC TGTGCCTGTC GGAGCACCAT TACGACGTGG AAGTGGAGCA CCTGCTGCTG
CAGTTGCTCG ACAACAACGA CAGCGACCTG GCCCCGATCC TGCGCCACTA CGAGGTCGTC
GCCGAACGCC TGCAGGCGCA GCTGGTCACC GCCTTGGGCA CCTTCAAGAA AGGCAATACC
CGCACCCCGG CGCTGTCGCC ACACATTACC CGCATGATCG AGCAAGCCTG GTTGCTGGCC
TCGATCGAAT ACGGCGTAGG CCAGGTGCGC AGCGCTCACC TGCTGCAGGC TCTGCTTGAC
GATGCTGAAC TGCGTCGCGT GGTGATCGCC TCGGCGCCGG AGCTGGAAAA AATCAACGCC
GATGACCTGC GCCTGAACCT TGCCGCGCTG GTGGAGGGTA GCGCCGAGTC CAGGCAGGCC
AGCCCACTGG CCAGCCCAGC GGCGCCAGTG AGCACGTCGA GCAAGGCCAG CGGCAAGACC
CCGGCACTTG ACCAGTACAC GGTCAACCTT ACCCAAAGCG CCCGCGAAGG CCGCATCGAC
CCGGTGCTGG GCCGTGAGTT CGAAGTACGG CAGATGGTCG ACATCCTCAC CCGCCGTCGG
CAGAACAACC CGATCCTCAC GGGCGAAGCC GGGGTCGGCA AAACCGCAGT GGTCGAAGGC
CTGGCGCTGC GCATCGCCCA GGGTGACGTG CCGGCGGTGC TCAAGGACGT TGCCCTGCAC
ACCCTCGACC TGGGCCTGTT GCAGGCCGGC GCCGGGGTCA AGGGCGAGTT CGAGAACCGC
CTCAAGGCTG TGATCGAAGA GGTCAAGCGC AGCCTGCACC CGATCATTCT GTTCATCGAC
GAAGCCCACA CCCTGATCGG CTCCGGCGGC CAGGCTGGGC AGAACGATGC CGCCAACCTG
CTCAAGCCGG CCCTGGCCCG TGGCGAGTTG CGCACCATCG CTGCCACTAC CTGGGCCGAA
TACAAGAAGT ACTTCGAGAA GGACGCCGCC CTCGCCCGCC GCTTCCAGGT GGTCAAAGTG
GAAGAGCCCG ACGAAGACAA GGCCATTCAC ATGCTGCGCG GCCTGCTCGG CAAGATGCGC
GAGCACCACA AGGTGGCGGT GATGGACGAA GCGCTGGTGC AGGCGGTACG CCTGTCCAAC
CGCTACATCA CCGGCCGCCA GCTGCCCGAC AAGGCGGTCA GCGTGCTCGA CACAGCCTGC
GCGCGCATTG CCCTGGCGCA ATCTTCGCTG CCCGGCGCAC TGGAAGACTG CCGCCGGCAG
ATCGACAACC TGCAAGCAGA AATCGGCGTG CTCGGCCACG AAGCCGGCAA GGGGCACGAC
CATGCCCGCC GCCTGGAAGC GCTGCAGGCT GCCCTGCAGG CCGAGCAGCA GCAGGAACAG
CAACTCAATG CCCAGTGGCA GCAGGAGCTG GAACTGGTCG AACAGCTCAA GGCGCTGGAC
GCCGCCAACG ATGCCGACGC CCAACAGCTC AATACCCTGC GTGCCGAGCT GGCGCGCGTG
CAAGGCGACC AGCCACTGGT CCACGCGCTG GTCGACAGCG GCGCCATCGC CCAGGTCATC
AGCGGCTGGA CCGGCATCCC GCTGGGCAAG ATGCTGCGTG ACGAAATCGA TACCGTGCAG
CGCCTGCCGG CCCTGCTTGG TGAACGCGTG CTGGGCCAGG ACCACGCCCT GCATGAGATC
GGCAAGCGCA TCAAGATTTC CCGAGCGCGC ATGGAAGACC CGAACAAACC GATTGGCGTG
TTCCTGCTGC TCGGCCCCAG CGGCGTCGGC AAGACCGAAA CCGCCCTGGC CCTGGCCGAC
ACCTTGTACG GCGGCGAGCG CAACCTGATC ACCATCAACA TGTCCGAGTA CCAGGAGGCC
CACACCGTGT CGAGCCTCAA GGGCTCGCCA CCCGGCTACG TCGGCTACGG CGAAGGCGGC
GTGCTGACCG AAGCGGTGCG CCGCAAGCCG TACAGTGTGG TGCTGCTCGA CGAGGTGGAA
AAAGCCCACC CCGACGTGCT CGAACTGTTC TTCCAGGTGT TCGACAAGGG CGTGCTGGAC
GATGGCGAAG GCCGCGAGAT CAATTTCCGC AACACGGTGA TCATCCTCAC CTCCAACACC
GGCACCGAGC GCATCATGCA GACCTGCCTG AACGCCACCG AGCTGCCGAC GCCCGAGGCG
ATCGTCGAAG ACCTGCGCGA CCAGCTCAAC CATGTGTTCA AACCGGCCTT CCTCGGTCGC
CTGAGCATCG TGCCGTTCTA CCCGGTGCAG GACCAGATCC TCGAGCGCAT CGTCGCCCTC
AAGCTCGAAC GCATCGCCAA GCGCTTCGCC CGCAACCACC AGGCCGAGCT CAGCTATGAC
CAGGCGCTGG TCAAGGCCAT CGCCGCGCGC TGCACCGAGG TCGACAGCGG CGCACGCAAC
ATCGACAACA TCCTGTCCCA GACCCTGATG CCCGAACTCG CCCAGCGCGT GCTCGAGCGC
ATGGCCCAGG ACGCGCCGAT CCAGCACCTT GCGATCGAGC TGGGCAGCGA TGGCGATTTC
GCCTATCGCC TGGCCTGA
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| Protein sequence | MNLKSLFAKL NETSRTATES AAALCLSEHH YDVEVEHLLL QLLDNNDSDL APILRHYEVV
AERLQAQLVT ALGTFKKGNT RTPALSPHIT RMIEQAWLLA SIEYGVGQVR SAHLLQALLD
DAELRRVVIA SAPELEKINA DDLRLNLAAL VEGSAESRQA SPLASPAAPV STSSKASGKT
PALDQYTVNL TQSAREGRID PVLGREFEVR QMVDILTRRR QNNPILTGEA GVGKTAVVEG
LALRIAQGDV PAVLKDVALH TLDLGLLQAG AGVKGEFENR LKAVIEEVKR SLHPIILFID
EAHTLIGSGG QAGQNDAANL LKPALARGEL RTIAATTWAE YKKYFEKDAA LARRFQVVKV
EEPDEDKAIH MLRGLLGKMR EHHKVAVMDE ALVQAVRLSN RYITGRQLPD KAVSVLDTAC
ARIALAQSSL PGALEDCRRQ IDNLQAEIGV LGHEAGKGHD HARRLEALQA ALQAEQQQEQ
QLNAQWQQEL ELVEQLKALD AANDADAQQL NTLRAELARV QGDQPLVHAL VDSGAIAQVI
SGWTGIPLGK MLRDEIDTVQ RLPALLGERV LGQDHALHEI GKRIKISRAR MEDPNKPIGV
FLLLGPSGVG KTETALALAD TLYGGERNLI TINMSEYQEA HTVSSLKGSP PGYVGYGEGG
VLTEAVRRKP YSVVLLDEVE KAHPDVLELF FQVFDKGVLD DGEGREINFR NTVIILTSNT
GTERIMQTCL NATELPTPEA IVEDLRDQLN HVFKPAFLGR LSIVPFYPVQ DQILERIVAL
KLERIAKRFA RNHQAELSYD QALVKAIAAR CTEVDSGARN IDNILSQTLM PELAQRVLER
MAQDAPIQHL AIELGSDGDF AYRLA
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