| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2601 |
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| Symbol | |
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| ID | 5192545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2964606 |
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| End bp | 2965223 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587054 |
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| Product | LexA repressor |
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| Protein accession | YP_001267920 |
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| Protein GI | 148547818 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) |
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| TIGRFAM ID | [TIGR00498] SOS regulatory protein LexA |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.829125 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTGCTCCA TGGACACTCT TACCCCCAAA CGCCGCGCCA TTTTCGAATT CATCCGTGAG
CGCATTGCCG AGCATGGTCA GCCGCCGAGC CTGGCCGATA TCGCCACGCG CTTCGGTTTT
GCCTCGCGCA GCGTTGCGCG CAAGCACATC ACCGCCCTGT GCCAGGCCGG TTACATCGAT
GTCACGCCAA ACCAGGCCCG GGGCATACGC CTGGCCGAAC CGCTGCGCCG GCCAGAAATC
CTCGAAATAC CCGTGCTGGG CCAGGTGGCG GCGGGTGCCC CCATCGGCCC GGACCTGGAC
ATCCACGAGC AGTTGCTGCT CGACCCCAGC CTGTTCCGCC GTACCCCCGA CTACCTGCTG
AAGGTGCGGG GCGACTCGAT GATCGACGAC GGCATCTTTG ACGGTGACCT GGTCGGCATC
CTGCAACAGG CTGACGCCCG CGACGGGCAA ATCGTGGTTG CGCGCCTGGA CGGCGAAGTG
ACCATCAAAC GCCTGCAACG CCAAGGCGGC ACTTACCGGC TGTTGCCACG TAACCCGGCC
TATGCGCCGA TCGATGTGCA GCCCGAACAG GACTTTTTCA TCGAAGGCGT GTTCTGCGGC
TTGCTGAGGC GCGACTGA
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| Protein sequence | MCSMDTLTPK RRAIFEFIRE RIAEHGQPPS LADIATRFGF ASRSVARKHI TALCQAGYID
VTPNQARGIR LAEPLRRPEI LEIPVLGQVA AGAPIGPDLD IHEQLLLDPS LFRRTPDYLL
KVRGDSMIDD GIFDGDLVGI LQQADARDGQ IVVARLDGEV TIKRLQRQGG TYRLLPRNPA
YAPIDVQPEQ DFFIEGVFCG LLRRD
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