Gene Pput_2600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2600 
Symbol 
ID5192544 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2963986 
End bp2964606 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content71% 
IMG OID640587053 
Producthypothetical protein 
Protein accessionYP_001267919 
Protein GI148547817 
COG category[S] Function unknown 
COG ID[COG4544] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.79466 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCGCCG TGGTCGACCT CGACAGGCTG CTGGAACAGC GCCGGGTATG GCGCGGCCGG 
CAGGCCCAGG CGCGGCCACT CGGGCTGCAG CCCACCGGCC ATGCGGCCCT CGACGAACGT
TTGCCGGAAG GTGGCTGGCC GGCGGCAGCA CTGAGCGAGC TGTTGCTGGC CAACCCCGGC
TGTGGCGAAT TGCAGTTGCT GTGGCCAACC CTGGCCCGGC TGAGTGCAGA AGCCAGCAGA
GTGGTGCTGG TGGCTCCACC CTTCATACCT TTTGCACCGG CCTGGCAGGC AGCGGGGGTG
GACCTGCGCT GGCTGGTACA GGTGGATGCC GAGCCTGCCG ATGCCCTCTG GGCTGCCGAA
CAGTGCCTGC GCTCGGGCAG TTGCGCGGCG GTGCTGTGCT GGCCGGAACG TGCCGATGAC
CGCGCCCTGC GGCGCTTGCA GGTAGCGGCC GAAACCGGGC AGGCACTGGC GTTCGCCTGC
AGGCCGCAGC AGGCGTTGCA CAACCCTTCA CCCGCAGCGC TGCGCATTGC AGTCGACACG
CGCCCGGCGC AATGGCGCGT GCTGAAAAGC CGGGGTGGCA TGCCTCCAGC GCTGCCTATT
CCCTGCCCGG GGCGGGGCTG A
 
Protein sequence
MGAVVDLDRL LEQRRVWRGR QAQARPLGLQ PTGHAALDER LPEGGWPAAA LSELLLANPG 
CGELQLLWPT LARLSAEASR VVLVAPPFIP FAPAWQAAGV DLRWLVQVDA EPADALWAAE
QCLRSGSCAA VLCWPERADD RALRRLQVAA ETGQALAFAC RPQQALHNPS PAALRIAVDT
RPAQWRVLKS RGGMPPALPI PCPGRG