Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2529 |
Symbol | codB |
ID | 5193147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2876213 |
End bp | 2877478 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640586982 |
Product | cytosine permease |
Protein accession | YP_001267848 |
Protein GI | 148547746 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1457] Purine-cytosine permease and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0365158 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCTCAC CCAGCGAATT TCCACTCAGC GAAGCCCCCC AGTCCGCCCG CAAGGGCCTG CTGCCGATCG CGATGGTCTT GTTCAGCTTC ACCTTCTTTA CCGGCACGAT GTTCGCCGGC GGCAAGCTGG GCATGGCATT CAGTTTTGTC GACATGCTGT GGGTGGCTAC CCTCGGCAAC AGTTTGCTTG CCTTGTATGC CGCAGTGCTG GCCTTCATCG CCTCACGCAG CGGGCTGAAT ACCGTGTTGA TGGGGCGCTT CTGTTTTGGT GAAGCGGGGA GCCGGCTCTC GGACTTTCTG CTGGGTTTTG CCGAACTGGG CTGGTATGCC TGGGGTACGG CCACGGTGGC CATCGTGCTG GTCAAGCTGC TGGGGCTGGC GGATGGTTTC GGCATGCCGT TGATGGTGCT GTTCGGGCTG GGTTTCAGCA TTACGGCCAT CATCGGGTTC AAGGGGCTGG ACCTGTTGTC GCGGGTGTCG GTGCCATTGA TGTTCGTGCT GCTGTTGGTG TCCATGTACA TCGCCACCCG CGATGCCGGT GGCTTTGCCG GCCTGGCTGC AGTCGTCCCG CATGAAACCA TGACCTTTTC GGCGGCAGTG ACCATGGTCT TCGGCACCTT CGCCAGTGGC GCCACCCAAG CCACCAACTG GACACGGCTG GCACGCAATG GCCGGGTAGC GGTGATCGCC AGCGTGGTGG CATTCCTCCT TGGCAACGGC CTGATGGTGG TGGCCGGGGC GTGGTGCGCG ATGGTTTATC AGCAGGCCGA TATCGTCGAC GTGATGATGC TGCAGGGCCT GTCGTTCGCG GCCGTGGTGA TGCTGTGCCT GAACCTGTGG ACCATTCAGG GTCCGACCAT CTACAACGTG TCGGCCGCCG CCTGCCACTT GTTGCGCAGC GAGCGCCGGC GCACGGCAAC GCTGGTGGCG GCCGGGGTTG GCATTGTGCT GGCGATGGGT GGCATGTACG AAATGCTGAT CCCGTTCCTG GTGCTGCTGG GGTCGATCAT TCCGCCGGTG GGTGGGGTGA TCATGGCTGA TTTCTGGTAC CGCCACCGCG GTAAATACCC GGCACTGGGT ACGGCACACC TGCCACGCTA CAACCTCACC GGGCTGTTTG CCTATGCCGT GGGCGCAGTA CTGGCCTATG CCTCACCGTG GGTCGCGCCG CTGGTGGGCA TCGCCGCCTC GGCAGTGTGC TACATCGTCA TTCTAGAGCT GGGCGCACGC CGCCGGGCGC CCGGCCAGGC AGGCGTCGAG CCATGA
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Protein sequence | MSSPSEFPLS EAPQSARKGL LPIAMVLFSF TFFTGTMFAG GKLGMAFSFV DMLWVATLGN SLLALYAAVL AFIASRSGLN TVLMGRFCFG EAGSRLSDFL LGFAELGWYA WGTATVAIVL VKLLGLADGF GMPLMVLFGL GFSITAIIGF KGLDLLSRVS VPLMFVLLLV SMYIATRDAG GFAGLAAVVP HETMTFSAAV TMVFGTFASG ATQATNWTRL ARNGRVAVIA SVVAFLLGNG LMVVAGAWCA MVYQQADIVD VMMLQGLSFA AVVMLCLNLW TIQGPTIYNV SAAACHLLRS ERRRTATLVA AGVGIVLAMG GMYEMLIPFL VLLGSIIPPV GGVIMADFWY RHRGKYPALG TAHLPRYNLT GLFAYAVGAV LAYASPWVAP LVGIAASAVC YIVILELGAR RRAPGQAGVE P
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