| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2419 |
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| Symbol | |
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| ID | 5195435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2764206 |
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| End bp | 2766296 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586875 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001267741 |
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| Protein GI | 148547639 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.56644 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCCTC GTGCCCCCCT TCTGGCCGGC CTGACGCTGG GCTTGTTCGG CCAGCCGATT
TCAGCGGCAC AACCCTTGCT GCTGAACGAA ACCTCCATCA CCGACGCCTA CCTCGAAGAG
CGCGCCGACG GGCCGGTGCA AGGCTATCGT GCCAACCGCT CTGCCACCGC CACCCGCACC
GATACCGACC TGCGCGACAC GCCGCAGAGC ATCGACGTGG TGCCCGCACA GGTGATCAAG
GACCTCAACA CCACCCGCAT CGACCGCGCC CTGGACTTTG CGGGTGGCGT GTCGCGGCAG
AACAACTTCG GCGGCCTGAC TTTCCTCAAC TACAGTGTGC GCGGCTTCAC CACGGGCGAG
CTGTACAAGA ACGGTTTCGC CATCAACCGC GGCAGCTACA GCGCGCCGGA CACGTCCAAC
ATCGAACGCA TCGAAGTGCT CAAAGGCCCG GCGGCCAGCC TGTACGGCCG TGGCGACCCT
GGCGGACTGG TCAACATCGT CACCAAGCGC CCCCAGGCCG AAGCCTTCAG TACCCTCACC
CTCAGCGCAG GCAGCTGGGA CCGCTACCGC ACCGCCCTGG ACGCCAACTC GCCGCTGGAC
AGCGAGGGGA ATCTGCTGGG CCGGATCAAC CTCGCCGTCG AAGACAACGA CAGCTTCCGC
GATCATGTCG GCAGCGAGCG CCGTATCGTC AGCCCCTCCC TGAGCTGGCA ACTGTCACCC
GACACCCGAC TGATGATCGA CACCGAGTTC TCCCGAACCG AGTCGGTGTT CGACCGAGGC
ATTCCGGCGG TCAACGGCGA AATGGGGTCG GTCAAGCGCT CGACCTTCCT TGGCGAGCCG
AATGACGGCG AGATCCGCAA CGACAACCAG ACCCTCGACG TGGCGCTGGA ACACGTGCTC
AACGACAACT GGACGCTGCG CCTGGCCAAC CACTACACCC AGGGTACGCT CAAGGGCAAC
AGCTCCGAGC CCCAGGCCCT GGTGGGCACC ACCATCACGC GCTTCTATCG CGAACGCGAC
TTCGAATGGA ACGACAACAT CACCCAGGCT GAGCTGCACG GGCAGTTCGA GCTGGGTGGC
TGGCAGCATC AGACCCTGGT CGGGCTGGAG TACGAAAACT ACCGCAACAG CCAGAAGTAC
CCGCAAAGCG CCACCTCCGC AGCGTATGGG CTGGATATCT ACAACCCGGT ATACGGCAAG
CCGAAGCCGG CCATCACCCG TGCCAACGAC TTCTTCGAGC ACACTGAAAG CTATGCGATC
AACCTGCAAG ACCAGATCGC CTTCACCGAG CGCTTGCGCG GGTTGCTGGG CATACGCCTG
GAGCGCTTCG AGCAGACCTC GCAGAACCGC ACCATGGGTC TGAGCAACAG CCAGGAAAAG
GACGTTGCCA CACCGCGCAT CGGGATGTTG TACCAACTGA CCCCGCAAGT CGGCGTGTTC
GCCAACGCAT CCACTTCGTT CAAACCCAAC ACCATCGGCA CCCAGGGCCA GGTGTACAAG
CCTGAAAAGG GCTTGGGTTA CGAGACCGGG GTCAAGCTCG ACCTTCTCGA CAGCCGCCTG
GGCGCGACCA TCGCCTTGTT CCATATCGAC AAGGAGAACG TCATCACCAC CGACGCCCTT
GGCGAGAGCG TGGCGGCGGG CGAAGCGCGC AGCCAAGGCC TGGACCTGCA GTTCAGCGGC
CAGCTGACCG ACGCGTTGCG AGTGATCGGC GCCTACGCCT ACATCGACGC CGAGGTCACC
AAAGGCGACG CAGCCCTGGC CAAAGGCAGC GACTTGCTCG GTATCGCCCG TAACAGCGGC
AGCCTGATGG GCGTGTACGA ATTCCAGGAC GGTGCCCTGC GCGGCTCGGA TGTGGGCGCG
GCGGTGAACT ACGTCGGCGA ACGCTCCGGC CAGGCCGGCA GCGACTTCAC CCTGGACGCC
TACAGCACGG TCGACCTGTT GGCGCACTAC AAAGCCAGCG AACAGGTCAC CGTCGGCCTT
AACCTCAACA ACCTGTTCGA CCGCAAGTAC TACGAACGCT CGTACAACAG CGCTTGGGTG
CTGCCCGGGG AGCCACGCAA CTTCAGTGTA AGCCTGACCC TGAGCCTTTG A
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| Protein sequence | MNPRAPLLAG LTLGLFGQPI SAAQPLLLNE TSITDAYLEE RADGPVQGYR ANRSATATRT
DTDLRDTPQS IDVVPAQVIK DLNTTRIDRA LDFAGGVSRQ NNFGGLTFLN YSVRGFTTGE
LYKNGFAINR GSYSAPDTSN IERIEVLKGP AASLYGRGDP GGLVNIVTKR PQAEAFSTLT
LSAGSWDRYR TALDANSPLD SEGNLLGRIN LAVEDNDSFR DHVGSERRIV SPSLSWQLSP
DTRLMIDTEF SRTESVFDRG IPAVNGEMGS VKRSTFLGEP NDGEIRNDNQ TLDVALEHVL
NDNWTLRLAN HYTQGTLKGN SSEPQALVGT TITRFYRERD FEWNDNITQA ELHGQFELGG
WQHQTLVGLE YENYRNSQKY PQSATSAAYG LDIYNPVYGK PKPAITRAND FFEHTESYAI
NLQDQIAFTE RLRGLLGIRL ERFEQTSQNR TMGLSNSQEK DVATPRIGML YQLTPQVGVF
ANASTSFKPN TIGTQGQVYK PEKGLGYETG VKLDLLDSRL GATIALFHID KENVITTDAL
GESVAAGEAR SQGLDLQFSG QLTDALRVIG AYAYIDAEVT KGDAALAKGS DLLGIARNSG
SLMGVYEFQD GALRGSDVGA AVNYVGERSG QAGSDFTLDA YSTVDLLAHY KASEQVTVGL
NLNNLFDRKY YERSYNSAWV LPGEPRNFSV SLTLSL
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