Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2408 |
Symbol | |
ID | 5195214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2752004 |
End bp | 2753245 |
Gene Length | 1242 bp |
Protein Length | 413 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640586865 |
Product | putative 3-hydroxyphenylpropionic transporter MhpT |
Protein accession | YP_001267731 |
Protein GI | 148547629 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00895] benzoate transport |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCATT CATCCGCGTC ATCAGGCAAG GCCGTGCTCA CCATCGGCTT GTGTTTTCTC GTTGCCTTGC TGGAAGGGCT GGACCTGCAG GCCACCGGCA TCGCCGCGCC GCACATGGCC AAGGCATTCA ACCTGAGCCC TGCCATGCTC GGTTGGGTAT TCAGTGCCGG GTTGCTGGGG TTGCTGCCCG GCGCGCTGAT CGGCGGTTGG CTGGCAGACC GCTTTGGCCG CAAAGCGATC CTGATCGTGG CGGTGCTGCT GTTTGGCGGC TTCTCGCTAG GGACCGCCCA TGCCCAGACC TACGACTCAC TGTTGATCGC GCGGCTGATG ACAGGGCTCG GGCTGGGGGC GGCGTTGCCG ATCCTGATCG CCCTGGCCAG CGAGGCGGCG CCTGAGCGTC TGCGGAGCAC GGCGGTCAGC CTGACTTACT GTGGTGTGCC GCTAGGCGGG GCGGTTGCGT CGCTGATCGG CATGGCCGGC GTGGACGACG GTTGGCGTAC GGTGTTCTAC GTCGGCGGCA TCGCACCGAT CGTGATCGCC TTCGTGCTGA TGATCTGGCT GAAAGAGTCC CAGGCATTCC GTGCCCAAGG CGTTGCCAAG GCTGGCAGTG AAGGTGTGCT TACCCAACTG TTCGGGCCGC AGCAGGCAAG CCGCACGCTG TTGCTGTGGG TGGCATGTTT CTTCACCCTG ACAGTGTTGT ACATGTTGCT CAACTGGCTG CCGTCGCTGT TGATCGGCCA AGGCTTCAGC CGACCGCAGG CGGGCGCCGT GCAGATTCTG TTCAACCTGG GTGGGGCGGC TGGATCGTTC CTGACCGGTC GGATGATGGA CCGCGGGTTT GCCGGGCGGG CGGTATTGAT CGCCTACGCC GGCATGCTGG CGTCGTTGGC GGGGCTGGGG CTGTCGAGCA GTTTCGGGCT GATGTTGCTG GCCGGATTCA CTGCAGGGTA TTGCGCCATT GGCGGCCAGT TGGTGCTGTA CGCGCTGGCG CCGACGCTGT ATTCGACCCA GGTGCGCGCA ACGGGCTTGG GCGCTTCGGT GGCGGTGGGG CGCCTGGGTT CCATGGCCGG TCCTCTGGCG GCCGGGCAGA TCCTTGCAGC AGGCGCAGGT GCGGGGGGGC TGCTGATGGC CGCGGCTCCA GGCCTGGTGC TCGCGGCGTT GGCGGCACGT GCGCTGCTGA AACACCGAAC CCGCACGCAA CGCCCTGAGC CGGGTGAGGC TGCGGCCCAG GACCCTGCAT AG
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Protein sequence | MHHSSASSGK AVLTIGLCFL VALLEGLDLQ ATGIAAPHMA KAFNLSPAML GWVFSAGLLG LLPGALIGGW LADRFGRKAI LIVAVLLFGG FSLGTAHAQT YDSLLIARLM TGLGLGAALP ILIALASEAA PERLRSTAVS LTYCGVPLGG AVASLIGMAG VDDGWRTVFY VGGIAPIVIA FVLMIWLKES QAFRAQGVAK AGSEGVLTQL FGPQQASRTL LLWVACFFTL TVLYMLLNWL PSLLIGQGFS RPQAGAVQIL FNLGGAAGSF LTGRMMDRGF AGRAVLIAYA GMLASLAGLG LSSSFGLMLL AGFTAGYCAI GGQLVLYALA PTLYSTQVRA TGLGASVAVG RLGSMAGPLA AGQILAAGAG AGGLLMAAAP GLVLAALAAR ALLKHRTRTQ RPEPGEAAAQ DPA
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