Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2382 |
Symbol | |
ID | 5190734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2717343 |
End bp | 2718305 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640586839 |
Product | gluconate 2-dehydrogenase |
Protein accession | YP_001267705 |
Protein GI | 148547603 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.54026 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAGC GAATCGTCCT GTATAAACGC CTGTCAGACG ACTTGATGGC ACGCCTGCAA GATCGCGTCG AGGTGACCTG GGTGGACACC ACCCAGCCCG ATGGCCTGGC CCGCCTGCGC GATGCGTTAC CGGGGGCGCA CGGGTTGCTG GGGGCCAGCC TGCGCCTGGA TGCCAGCCTG CTCGACCTTG CCCCGCAACT CGAAGTGGTG TCGAGCGTTT CGGTAGGCGT AGACAACTAC GACATTGCTG AATTCAGCAG GCGTGGTGTG ATGCTGACCA ACACGCCCGA CGTGTTGACA GAAACCACGG CCGACACAGG CTTTGCCTTG ATCCTGGCTA CCGCCAGGCG GGTGGTGGAG CTGGCGAACT GGGTGCGTGA CGGCCGCTGG CAGGCCAACT TGGGGCCGGC GCATTTTGGC AGTGATGTGC ACGGCAAGAC GCTAGGCATC GTCGGCATGG GCCGCATCGG CGAGGCCCTG GCCCGGCGCG CGGCCGCTGG CTTTGGCATG CGCGTGCTGT ATCACAGCCA GCGTGCCAAG CCCGAGGTGG AAGCACGCTA TGCCGCATGC CAGTGCAGCC TGGATGAGCT GTTGCAGCAG GCAGACTTCG TTTGCCTGAC GGTGCCGTTG AGCGCCAGCA CCGAAGGCCT GATAGGCGCA CGGGAACTCG CGTTGATGAA GCCTGAGGCA ATCCTGGTGA ACATCTCACG CGGGCGTGTG GTGGATGAGC AGGCGCTGAT CGAAGCGCTG CGGGCCAGGC GCATCCGCGG AGCGGGGCTG GACGTGTTCG TGCACGAGCC ACTGCCGACC GACTCGCCGC TGTTGCAGCT CGATAACGTG GTAGCGACCC CACACATCGG CTCGGCGACC GAGGACACCC GCCAGGCCAT GGCGCGTTGC GCGGTGGACA ACCTGCTCAG CGCGCTGGCC GGTGAGCGGC CGGTAAACCT GGTCAACGGC TGA
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Protein sequence | MKKRIVLYKR LSDDLMARLQ DRVEVTWVDT TQPDGLARLR DALPGAHGLL GASLRLDASL LDLAPQLEVV SSVSVGVDNY DIAEFSRRGV MLTNTPDVLT ETTADTGFAL ILATARRVVE LANWVRDGRW QANLGPAHFG SDVHGKTLGI VGMGRIGEAL ARRAAAGFGM RVLYHSQRAK PEVEARYAAC QCSLDELLQQ ADFVCLTVPL SASTEGLIGA RELALMKPEA ILVNISRGRV VDEQALIEAL RARRIRGAGL DVFVHEPLPT DSPLLQLDNV VATPHIGSAT EDTRQAMARC AVDNLLSALA GERPVNLVNG
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