Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2377 |
Symbol | |
ID | 5192125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2711655 |
End bp | 2712908 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640586834 |
Product | gluconate 2-dehydrogenase acceptor subunit |
Protein accession | YP_001267700 |
Protein GI | 148547598 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.105053 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATGA AGACACTGTT GATCGCCACC CTGGTGCTGG GTGCCGGCGC GGCTGCACAG GCCGTAGCGA ATGACGATGC ACAGGTACGC CTGGGCGAGT ACCTGGCCCG CGCCGGTGAC TGCGTGGCCT GCCATACCGC CAAAGACGGC AAGCCCTTTG CCGGTGGGTT GCCGATGGAA ACGCCGATTG GCACGGTGTA CTCCACCAAC ATCACCCCGG CGGCCAGTGG CATTGGCCAG TACAGCTTCG AAGACTTCGA CCAGGCCGTG CGCAGGGGTA TTGGCAAAGA TGGCAGTACG CTCTATCCGG CCATGCCATA CCCGTCGTAT GCACGGGTCA GCGAGCAGGA CATGCAGGCG CTGTACGCCT ATTTCATGAA GGGCGTGGAG CCTGTCGAGC AGGCGAACAA GGCCTCTGAC ATTCCCTGGC CGCTGAGCAT GCGCTGGCCG CTGGCAATCT GGCGCGGCCT GTTCGCACCA GAGGCCAAGC CCTGGCAGGC ATCGGCGACA GCTGACCCTG TGGTGAACCG CGGTGCGTAC CTGGTCGAGG GCCTTGGGCA TTGTGGCGCT TGTCATACGC CGCGGGCGCT GACCATGCAG GAGAAGGCCC TGAGCGCGGC CGATGGCGAG CAGTTTCTGG CCGGCAGCGC ACCGCTGGAG GGCTGGATTG CCAAGAACCT GCGTGGTGAT CACAAAGACG GCCTGGGCAG CTGGAGCGAA GCGCAGTTGG TGCAGTTTCT CAAGACTGGG CGCAGTGATC GCAGCGCCGT GTTCGGCGGC ATGAGCGATG TGGTCGAGCA CAGCATGCAG CACATGAGTG ATGCCGACCT GACCGCTATC GCCCGCTACC TGAAAACCCT GCCGCCGAGT AATCCGGATG ACCAGCCGCA TGTGTACGAC AAGCAAGTCG CGGATGCGCT ATGGAAGGGT GACGACAGCA AGCCTGGGGC GGCGGTGTAC ATCGACAACT GCGCGGCCTG CCACCGCACC GACGGGCAGG GCTACACCCG CGTGTTCCCG GCTTTGGCCG GCAACCCGGT GGTGCAGACT GCGGATGCCA CGTCGCTGAT CCATGTGGTG CTCGCCGGTG GCACGGTACC GGCAACGCAC AGTGCACCGT CGAACTTCAC CATGCCGGCT TTCGGCTGGC GCCTGAGTGA CCAGGAGGTT GCCGAGGTGG TGAATTTCAT TCGCAGCAGC TGGGGTAACC AGGGCAGTGC CGTCACGGCC GGTGATGTGA AGTCGCTTCG CTGA
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Protein sequence | MSMKTLLIAT LVLGAGAAAQ AVANDDAQVR LGEYLARAGD CVACHTAKDG KPFAGGLPME TPIGTVYSTN ITPAASGIGQ YSFEDFDQAV RRGIGKDGST LYPAMPYPSY ARVSEQDMQA LYAYFMKGVE PVEQANKASD IPWPLSMRWP LAIWRGLFAP EAKPWQASAT ADPVVNRGAY LVEGLGHCGA CHTPRALTMQ EKALSAADGE QFLAGSAPLE GWIAKNLRGD HKDGLGSWSE AQLVQFLKTG RSDRSAVFGG MSDVVEHSMQ HMSDADLTAI ARYLKTLPPS NPDDQPHVYD KQVADALWKG DDSKPGAAVY IDNCAACHRT DGQGYTRVFP ALAGNPVVQT ADATSLIHVV LAGGTVPATH SAPSNFTMPA FGWRLSDQEV AEVVNFIRSS WGNQGSAVTA GDVKSLR
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