| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2348 |
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| Symbol | |
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| ID | 5195157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2679691 |
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| End bp | 2681013 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640586805 |
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| Product | methyl-accepting chemotaxis sensory transducer |
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| Protein accession | YP_001267671 |
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| Protein GI | 148547569 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0401397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGATT TCCACCGCAA GTCTGATTTG GCAGAAATCC AGCGCAGCCG CCAGGCGTTG
GCCAATGCGC AAGCCAAACT GGCCGCTATC GGCCGTTCCA TGGCAATGAT CGAGTTCGCC
CCTGATGGCA CTATCCTCGA CGCCAACGAG CGCTTCTGCC AGGCCATGGG CTACAACAGC
GCCGACGAAC TGCGAGGCAA GCACCACAGG CTGTTCTGTG AGCCGGACTA TGCAAAAAGC
GCCGAATACC AGCAACTGTG GCGCGAGTTG GGGCAGGGCA AGGCAATCAG CGGTACGTTC
GAGCGCATCG ACAAGGCGGG GCGCGAGGTC TGGCTGGAAG CCAGCTACAT GCCCGTGCTG
GACGAGCACC GGCAAGTCAC CAGCGTAATT AAGGTGGCAT CGGACATTAC CCAGCGGGTG
GTGCTGGAGC ACGAGAGCGA AAGCCTGCTC AAGGCCATCA GCCGCTCCAT GGCGGTGATC
GAATTCACCC CGCAAGGCCG GGTGATCAAG GCCAATCAGA ATTTTCTCGA CACCATGGGC
TACCGCCTTG ATGAAGTGGT TGGCCGCCAT CACGGGCTGT TCTGCCTGGC GCATGAACGC
GAATCGGCCC AGTACCGGGA GTTCTGGGCT TCGCTGAACC GTGGCGAATA CCACTCGCAC
CGCTTCGAAC GCGTCAACAA GCAAGGCCAG ACTGTTTTCC TGGAGGCCTC CTACAACCCG
ATCTTCGACA GCAAGGGCCG CCTGTGCAAA GTGGTCAAGT TTGCCAGCGA CATCACCCAT
CAGGTCTGCA CCCAGCAAAG CGCCGCCCAT GCCGCCCATG CCAGTTCGGT GCAGACCGAT
GCCTGCGCGC GCAAGGGTAC CGAAGTGGTG CAGCAGACCG TGCAGGTAAT CGAGCAGATT
TCCCAGGAGC TTAACGACGC AGCGCGCAGC ATCGATGCGG TAAACAAGCA ATCGGATGTG
ATCGGGCAGA TTGTGCTGAC CATTCGGGGC ATTGCCGACC AGACCAACCT GTTGGCCCTT
AATGCAGCCA TCGAGGCCGC GCGTGCCGGC GAGCACGGGC GAGGCTTTGC CGTGGTGGCC
GATGAGGTGC GCAACCTGGC CGCGCGAACC AGCAAGGCCA CCCTGGAAAT CGTCGATGTG
GTGCGGCAGA ACCACGACCT GTCGCTATTG GCAGTGGCCA GCATGCAATC GAGCCTCAAC
CGCACCGGTC ACGGCGTGGC GCTGGCCAAT GAGGCGGGGA CGGTGATCAT GGAAATCCAG
CAAGGCTCAC GGCACGTCGT GGATGCCATC AGCCAGATAA CCTCGACGCT GCAATTGCAT
TGA
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| Protein sequence | MFDFHRKSDL AEIQRSRQAL ANAQAKLAAI GRSMAMIEFA PDGTILDANE RFCQAMGYNS
ADELRGKHHR LFCEPDYAKS AEYQQLWREL GQGKAISGTF ERIDKAGREV WLEASYMPVL
DEHRQVTSVI KVASDITQRV VLEHESESLL KAISRSMAVI EFTPQGRVIK ANQNFLDTMG
YRLDEVVGRH HGLFCLAHER ESAQYREFWA SLNRGEYHSH RFERVNKQGQ TVFLEASYNP
IFDSKGRLCK VVKFASDITH QVCTQQSAAH AAHASSVQTD ACARKGTEVV QQTVQVIEQI
SQELNDAARS IDAVNKQSDV IGQIVLTIRG IADQTNLLAL NAAIEAARAG EHGRGFAVVA
DEVRNLAART SKATLEIVDV VRQNHDLSLL AVASMQSSLN RTGHGVALAN EAGTVIMEIQ
QGSRHVVDAI SQITSTLQLH
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