Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2343 |
Symbol | |
ID | 5194153 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2674417 |
End bp | 2675844 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640586800 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001267666 |
Protein GI | 148547564 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.835742 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGCACA GCATCCTGGT CGTCGAGGAT GATGAAATCC TTGCCGACAA CATTCGCACC TACCTCAGCC TCAAGGGCTA CGAAGTCATC GTGTGCCACA GCGCGGAGCT GGCGCTGGAG CAGATCAAGC GGGCGCAACC TGACGCGGTG CTGACCGACA ACTCGTTGCC AGGCATGAGC GGGCACGACC TGCTGCGGAC GCTGGTGGCC CGCGCGCCGG ACCTTAAAGT GATCATGATG ACCGGCTACG GCAATGTCGA AGATGCCGTG CAGGCGATGA AGGAGGGCGC CTTTCATTAC CTGACCAAGC CGGTAGTACT GGCCGAGCTC AAACTGACCC TGGACAAGGC CCTGGCTACC GAGCGTATGG AGCGCACACT GTCATTCTAC CAGGAGCGTG AGGCGCAGAA GTCCGGGTTG CAGGCATTGA TCGGCGAGTC GCCGGTGATG CTCACCCTCA AGCACACCCT GCGCCAGGTG CTCGATGCCG AGCGGCGCAT GGCCAGTGAC GACCTGCCAC CGGTGCTGAT CGAAGGCGAG ACCGGTACGG GCAAGGAACT GGTGGCCCGT GCCCTGCATT TTGATGGTTC GCGCAGTAAA GGGCCGTTCA TCGAGTTCAA TTGCGCTTCG ATCCCTGCCA ACCTGCTTGA GGCTGAACTG TTTGGCCACG AGAAGGGCGC GTTCACCGAT GCCAAGGAGC GCCGGGTGGG GCTGGTGGAG GCTGCCGATG GCGGCACCCT GTTCCTTGAC GAGATCGGCG AAATGGACCT GGTGCTGCAG GCCAAGCTGC TCAAGTTGCT GGAGGACCGC AGCATCCGCC GGATTGGTGC GGTGAAGGAA CGCAAGGTGG ATCTGCGGGT GATCAGCGCC ACCAACTGTA ACCTGGAGCA AATGGTGCAG CAGGGCAAAT TCAGGCGTGA CCTGTTCTTC CGGCTTCGCA TTATCGCCCT GAAGGTGCCG CGCCTGTATT CGCGTGGGCA GGACATTCTG CTACTGGCGC GGCATTTCCT TGCCCACCAT AGCCGGCGTT ATGGCAAGCC GAACCTGCGC TTTTCAGCCG AAGCCGAAAG CCTGATGCTC GGTTATAGCT GGCCTGGCAA TGTGCGTGAA TTGCGCAACA TGCTGGAGCA GACCGTGTTG CTGGCGCCGA ACGAGGTGGT GCAGGCGCAT CAGTTGAACC TGTGCATGAC CTTGGTTGAC GAGCCGTTGG CGCAACAGCC GATGGCGACC ATGTTCGAAA TGCCGCGGCA CGAGCCAGAG CCGGGTACAA GCCTGCCTGA CATGGAGCGT GACCTTGTCT GCAAGACCCT GGACCGCACC GACTGGAACG TGACCAAGTC GGCGCGGATG CTTGGGTTGT CGCGGGATAT GCTGCGTTAC CGGATCGAGA AGTTGGGGCT GACCCGGCCT GACAAGCGTC AGTGGTAG
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Protein sequence | MEHSILVVED DEILADNIRT YLSLKGYEVI VCHSAELALE QIKRAQPDAV LTDNSLPGMS GHDLLRTLVA RAPDLKVIMM TGYGNVEDAV QAMKEGAFHY LTKPVVLAEL KLTLDKALAT ERMERTLSFY QEREAQKSGL QALIGESPVM LTLKHTLRQV LDAERRMASD DLPPVLIEGE TGTGKELVAR ALHFDGSRSK GPFIEFNCAS IPANLLEAEL FGHEKGAFTD AKERRVGLVE AADGGTLFLD EIGEMDLVLQ AKLLKLLEDR SIRRIGAVKE RKVDLRVISA TNCNLEQMVQ QGKFRRDLFF RLRIIALKVP RLYSRGQDIL LLARHFLAHH SRRYGKPNLR FSAEAESLML GYSWPGNVRE LRNMLEQTVL LAPNEVVQAH QLNLCMTLVD EPLAQQPMAT MFEMPRHEPE PGTSLPDMER DLVCKTLDRT DWNVTKSARM LGLSRDMLRY RIEKLGLTRP DKRQW
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