Gene Pput_2316 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2316 
Symbol 
ID5193086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2638313 
End bp2639611 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content64% 
IMG OID640586773 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001267639 
Protein GI148547537 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGA TCCTGGTGCG GTTGTACCTG GTGATCATCG TCGCCTACGC CGGCGCATTG 
CTGTTCATCC CTGACACCAT TGTCGGCCTG TTCCGCGACC GGTTCATGGC CTACAACCTG
GACCAGGCCA AGGGTGTACA AGCGTTGATC GTGCGCCAGT TCCGCCAGGC CCCGCGCGAG
CAGTGGCCAG CGGTGGAGCA GGAACTGGCC AGTGATTTCG CGCCGCTGGA ACTGCAGCTG
CTGCGCAGGG ATCAGGCCGG TTTGAGCGAT GAGGAGCAGG CGCGCCTGGA GCATGGCCTG
TACGCAGTGC GCATTGCCGA GTGGGGCTAT TACGAGACGG TGCTGGCGCC GCTGGACAAG
GAGTGGCTGG TACGCCTGCA TTCCCCGCCA GACCCGCTGG ACATCAACGT GCTGTCGTGG
GGCGTGACCG TATTGATTGG TGCAGCCATG CTGGGTTGCC TGCTGCTGTG GGTTTGGCCG
CACTGGCGTG ATCTGGAGCG CCTCAAGGAG ACCGCTCGGC GCCTGGGCCA GGGGCAGATG
GCTGAGCGTA CGCACATTTC GCCTCACTCC AACATTGGTG AGCTGGCCGG GGTATTCGAC
ACCATGGCCA GTGACCTGGA ACGCCATGTC AACCAGCAGC GTGAACTGCT CAATGCGGTA
TCGCACGAGT TACGCACGCC ACTGACCCGG CTGGACTTCG GCCTGGTGCT GCTGTTCGAC
GAAGTGCCGC CAGCCAGCCG CAAGCGCCTG CTGGAGCTGG TCGGGCATGT GCGCGAGCTG
GATGAACTGG TGCTGGAGCT GCTGTCCTAC AGCCGGTTGT ACAATGCCGA TCAGGCGCGA
GAGCGGGTGG AGGTATCGCT GCTGGAGCTG GTCGACAGTG TGCTTGGGGG CTTTGCCGAG
GAACTCGATG GCCGGGGTAT CCAGTGGGAA GTGCGCGCCG AGGGTGAGTT GCCGCGCTTT
GTACTGGACC CGCGACTGAC GGCGCGCGCG GTGCAGAACC TGGTGCGCAA TGCCATGCGC
TATTGCGATG AAAGCCTGTT GCTGCGCCTG CGCCTGGAAG CCGATGGCGC CTGCTTGCTG
ACGGTTGAGG ATGACGGGAT TGGCGTCCCT GTGGAGGAGC GCGAGCGGGT GTTCCAGCCG
TTCTACCGTC TGGACCGCAG TCGCGATCGC AACACCGGTG GTTTTGGCCT GGGGTTGGCC
ATCAGCCGCC GGGCGATCGA GGGGCAGGGT GGTACCTTGA CCCTGGCGCA GTCGGCGCTG
GGTGGGGCGC AGTTCAGGAT TCGTTTGCCC GCCGGATGA
 
Protein sequence
MLKILVRLYL VIIVAYAGAL LFIPDTIVGL FRDRFMAYNL DQAKGVQALI VRQFRQAPRE 
QWPAVEQELA SDFAPLELQL LRRDQAGLSD EEQARLEHGL YAVRIAEWGY YETVLAPLDK
EWLVRLHSPP DPLDINVLSW GVTVLIGAAM LGCLLLWVWP HWRDLERLKE TARRLGQGQM
AERTHISPHS NIGELAGVFD TMASDLERHV NQQRELLNAV SHELRTPLTR LDFGLVLLFD
EVPPASRKRL LELVGHVREL DELVLELLSY SRLYNADQAR ERVEVSLLEL VDSVLGGFAE
ELDGRGIQWE VRAEGELPRF VLDPRLTARA VQNLVRNAMR YCDESLLLRL RLEADGACLL
TVEDDGIGVP VEERERVFQP FYRLDRSRDR NTGGFGLGLA ISRRAIEGQG GTLTLAQSAL
GGAQFRIRLP AG