Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2302 |
Symbol | |
ID | 5193970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2618685 |
End bp | 2620418 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640586759 |
Product | ABC transporter related |
Protein accession | YP_001267625 |
Protein GI | 148547523 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCGGCC TGTTCGCAAG GCTGGTGGAT TCCAGCGACC CTGTACTCAT GCGCCAGGCG TTGGCCTGGC TGTATGGTTT CGTGCGCCCA CACCGACGTG CCATCGGCCT GTTGCTCGGC TTATCGCTGG GTGCATCGCT GCTGGCGCTG GCGCAACCCT GGCTGGTCAA GACCCTGATC GACGAAGGGC TGTTGGCCAA GGACTACCAG ACCCTCTGGC ACATGGCGGC AATCATGATC GGCGCGGGCC TGCTGGGCAC TGTGCTGGCC GGCGTCAACC GCTACCTGCA TACGCGCCTG TCGGGGCGCA TCCTGTTCGC CTTGCGCGAT GACCTTTACC GCCATCTGCA GCAATTGTCA CCGACCTTCT ACGGGCGGCG GCGTATCGGC GACATCCTTT CGCGGCTGGA TGGCGATGTG GCAGAGATCC AGCGCTTTGC CGTGGACTCG CTGTTCTCGG CGGTGTCGGC GGTGATCGGC CTGGTGGGTG CGGTGACGTT GATGCTGATG CTGTCGTGGC AGTTGTCCCT GTTGCTGGCG GTGCTGGTGC CGATCGAGGT GCTGTGGCTG CGCTGGATGC GGCGCAAGGT GGAACGCGAA GTGCGCAACC TGCGTGAGCG CTCGGCGGAT GTGTCGTCTT TTCTGGTCGA GACCCTGCCG GCGATGAAGT TCATCCAGGC GGCCGGCCAG CAAGGCCGGG AAGCAGGGCG CCTGGACCAG CTTGGGCAAG GTTACATGCG CCAGCTGCTG AAGGTGCAGG TGACCGAATT CTTCACCCAG GCCATCCCCG GCACGCTCAC CTCGTGGTGC CGCGCCTGTG CGTTTCTGGT CGGTGGCTGG TGGGTGATCC AGGGTACTTG GCAGTTGGGC GCGTTGATCG CCTTTTCTAC CTACATGGGC ATGGCCGTGG GGCCGGTGCA GAGCCTGCTG GGCCTGTATG TGGCGGTGCA GCGCATGGCC GTGAGCCTGG GGCGGGTCAT GGAGCTCAAG CGCGAAGCGG TGACCGTGCA TCAGGCAGTC AACCCGCAGC CCATCCCCGA TGGCCCAGGC GAGTTGCGCC TGGAGGCGCT GAGCTTTGCC CATGAGGGGC GCCAGGGTGC GGTACTGAAC AACGTGCAGG TGAGCATCCC GGGTGGCCTG AAAGTCGCCA TCAGCGGTGC CTCCGGCGTG GGCAAGTCAA CCCTGATCGA CCTGCTGCAG CGCTTCTACG ACCCGGACGC CGGGCGCATC CTGCTGGACG GCGTCGACCT GCGCGACCTG GACCTGGCTG CGCTGCGCAG GCGAATCGCC GTGGTCAGCC AGGACATCGT GCTGTTCCGT GGCACCCTGG CGCAGAACCT GGCTTATGGC GTGCCCGAGG CCAGCCGTGA TGAACTGGAG CGGGTGGTGC GCCTGGCGCG GCTGGACAGC CTGGTCGACA GCCTGCCGCT GGGCCTGGAC GGCCTGCTGG GCGAGCGTGG CCAGCAGTTG TCCGGGGGGC AGAAGCAGCG TATTGCCATT GCTCGTGCAG TGTTGCAGGC CCCGGCGATT CTGGTGCTGG ACGAGGCCAC TTCGGCGGTG GATGAGGCCA CCGAACGTGA AGTGATCGCG GCCATCGACC AGCTGTTCGC CGGCCGCACG CGCATCCTGA TCAGCCACCG GGCTTCGACC CTGGCCGATG CCGACCTGCA TCTGCAACTG CATGACGGTC AGTTGCAGGT ACTGGCGCAG GAGGTGATCA AGCATGGGCA CTGA
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Protein sequence | MGGLFARLVD SSDPVLMRQA LAWLYGFVRP HRRAIGLLLG LSLGASLLAL AQPWLVKTLI DEGLLAKDYQ TLWHMAAIMI GAGLLGTVLA GVNRYLHTRL SGRILFALRD DLYRHLQQLS PTFYGRRRIG DILSRLDGDV AEIQRFAVDS LFSAVSAVIG LVGAVTLMLM LSWQLSLLLA VLVPIEVLWL RWMRRKVERE VRNLRERSAD VSSFLVETLP AMKFIQAAGQ QGREAGRLDQ LGQGYMRQLL KVQVTEFFTQ AIPGTLTSWC RACAFLVGGW WVIQGTWQLG ALIAFSTYMG MAVGPVQSLL GLYVAVQRMA VSLGRVMELK REAVTVHQAV NPQPIPDGPG ELRLEALSFA HEGRQGAVLN NVQVSIPGGL KVAISGASGV GKSTLIDLLQ RFYDPDAGRI LLDGVDLRDL DLAALRRRIA VVSQDIVLFR GTLAQNLAYG VPEASRDELE RVVRLARLDS LVDSLPLGLD GLLGERGQQL SGGQKQRIAI ARAVLQAPAI LVLDEATSAV DEATEREVIA AIDQLFAGRT RILISHRAST LADADLHLQL HDGQLQVLAQ EVIKHGH
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