Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2274 |
Symbol | |
ID | 5190509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2587308 |
End bp | 2589308 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640586731 |
Product | peptidase U32 |
Protein accession | YP_001267597 |
Protein GI | 148547495 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0826] Collagenase and related proteases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.9196 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCTTC CAAAGAATCA CCTGGAACTG CTCAGCCCTG CCCGTGACGT GGCCATCGCC CGTGAAGCGA TCCTGCACGG CGCTGACGCC ATCTATATCG GCGGCCCGAG CTTCGGCGCG CGCCATAACG CCTGCAACGA AGTCAGCGAT ATCGCCGAGC TGGTCGAGTT CGCCCATCGC TACCATGCAC GCGTGTTCAC CACCATCAAC ACCATCCTGC ACGACAACGA GCTGGAGCCG GCGCGCAAGC TGATTCACCA GCTGTACGAT GCCGGCGTTG ACGCGCTGAT CGTGCAAGAC CTTGGGGTGA TGGAGCTGGA CATCCCGCCG ATCGAGCTGC ATGCCAGCAC CCAGACCGAC ATCCGCACCC TGGAACGGGC CAAGTTCCTC GACCAGGCCG GGTTCTCGCA ACTGGTATTG GCGCGGGAGC TGAACCTGCA GCAAATCCGC GCCATCGCCG CCGAAACCGA TGCCGCCATC GAGTTCTTCA TCCACGGCGC GCTGTGCGTG GCGTTCTCTG GCCAATGCAA CATTTCCCAT GCGCAGACCG GCCGCAGCGC CAACCGTGGT GATTGCTCGC AAGCCTGCCG CCTGCCCTAC ACGCTGAAAG ATGACCAGGG CCGCGTGGTT GCGTTCGAGA AACACCTGCT GTCGATGAAG GACAACAACC AGACCGCCAA CCTGGCTGAC CTGGTCGATG CCGGCGTGCG CTCGTTCAAG ATCGAGGGCC GCTACAAGGA CATGGGCTAT GTGAAGAACA TCACCGCCCA TTACCGCAAA GAGCTCGATG CCATCCTTGA AGACCGCCCT CAGTACGCCC GCGCGTCCAG CGGCCGTACC GAACACTTCT TCCTGCCCGA CCCGGATAAA ACCTTCCACC GCGGCAGCAC CGACTACTTC GTGACCGACC GCAAGGTCGA TATCGGCGCC TTCGACTCGC CAACCTTCAC CGGCCTGCCG GTGGGCGTAG TGGAAAAGGT CGGCAAGCGT GACATGCAAG TGGTCACCGA CGTACCGCTG ACCAACGGCG ACGGCCTCAA TGTGCTGGTC AAGCGCGAAG TGGTGGGCTT CCGCGCCAAC ATCGCCGAAC CGCGTGGCGA ATTCGAAGAA GACGGCCAGA AGCGCTACCG CTATCGCGTC GAGCCCAACG AAATGCCCGA AGGCCTGCAC AAGCTGCGGC CCAACCACCC GCTGTCGCGC AACCTCGACC ACAACTGGCA ACAGGCCCTG CAACGCACCT CCTCCGAACG CCGGGTCGGC GTGGAGTGGC ACGCTGTCCT GCGCGAGCAG CGCCTGATGC TTACCCTCAG CAGTGAAGAA GGCGTGAGCG TGCAGGTGGC CCTGGACGGC CCATTCGGCG TAGCCAACAA GCCGCAGCAG GCACTGGAGC AGTTGCACGA CCTGCTCGGC CAGTTGGGCA CCACCCTGTA CCACGCCGAC CGCATCGAAC TGGATGCCCC GCAGGCGTAC TTCATTCCCA ACTCGCAGCT CAAGGCCCTG CGCCGCGAAG CCATCGAGGC ACTGACTGCA GCACGCGTGC AGGCGCATCC GCGTGGCGGG CGCAAGGCCG AGACCACGCC ACCGCCGGTG TACCCCGAGT CGCACCTGTC GTTCCTGGCC AACGTATACA ACCAGAAGGC CCGCGATTTC TACCACCGCC ACGGTGTGCA ACTGATCGAT GCGGCCTATG AAGCGCATGA AGAACACGGC GAAGTGCCGG TGATGATCAC CAAGCATTGC CTGCGCTTCT CCTTCAACCT GTGCCCCAAG CAGGCCAAGG GCGTGACCGG CGTGCGTACC AAGGTGGCAC CGATGCAGCT GATTCAGGGT GACGAAGTGC TGACCCTGAA GTTCGACTGC AAGCCGTGCG AGATGCATGT GATCGGCAAG ATGAAGAGCC ACATCATCGA CCTGCCGACC CCGGGCAGCG CGGTGGCCCA GGTGGTGGGG CATATCAGCC CCGAAGACTT GCTCAAGACC ATCCCGCGCG GACCGCACTG A
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Protein sequence | MSLPKNHLEL LSPARDVAIA REAILHGADA IYIGGPSFGA RHNACNEVSD IAELVEFAHR YHARVFTTIN TILHDNELEP ARKLIHQLYD AGVDALIVQD LGVMELDIPP IELHASTQTD IRTLERAKFL DQAGFSQLVL ARELNLQQIR AIAAETDAAI EFFIHGALCV AFSGQCNISH AQTGRSANRG DCSQACRLPY TLKDDQGRVV AFEKHLLSMK DNNQTANLAD LVDAGVRSFK IEGRYKDMGY VKNITAHYRK ELDAILEDRP QYARASSGRT EHFFLPDPDK TFHRGSTDYF VTDRKVDIGA FDSPTFTGLP VGVVEKVGKR DMQVVTDVPL TNGDGLNVLV KREVVGFRAN IAEPRGEFEE DGQKRYRYRV EPNEMPEGLH KLRPNHPLSR NLDHNWQQAL QRTSSERRVG VEWHAVLREQ RLMLTLSSEE GVSVQVALDG PFGVANKPQQ ALEQLHDLLG QLGTTLYHAD RIELDAPQAY FIPNSQLKAL RREAIEALTA ARVQAHPRGG RKAETTPPPV YPESHLSFLA NVYNQKARDF YHRHGVQLID AAYEAHEEHG EVPVMITKHC LRFSFNLCPK QAKGVTGVRT KVAPMQLIQG DEVLTLKFDC KPCEMHVIGK MKSHIIDLPT PGSAVAQVVG HISPEDLLKT IPRGPH
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