| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2252 |
|---|
| Symbol | |
|---|
| ID | 5190224 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 2561254 |
|---|
| End bp | 2561676 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640586709 |
|---|
| Product | endoribonuclease L-PSP |
|---|
| Protein accession | YP_001267575 |
|---|
| Protein GI | 148547473 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0251] Putative translation initiation inhibitor, yjgF family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCCCAT CAAGCGCATT CCAGCTAAGC AACCCCGAAG GCCTCTACGA CCCCAGTGGC
AACGCCTACT CCCATGTCGC CGAAGTGCGC GCTGACAGCC GTCTGCTGTT CATCGCCGGT
CAGGGTGGGG AGGATAGCCA GGGCCAGTTG TCACCCGTGT TCGCCGAACA GGCCCGGCAG
GCGCTGGCCA ACCTGAAACG GGCCCTGGCG TCGAAAGGTG CCAGCCTGGC CCAGGTGTTC
AAGCTGACCC TGCTGATTGT CGAGCACTCC GAAGCGCGCC TGCACCAATG GGTGGCCGAG
GCCGACAGGG CCTGGGGGGC GCACATGAAA CCGACCTGCA CGCTGATACC GGTGCCCCGG
CTGGCGCTGG ACGGCATGCT GGTGGAGATC GAAGCAGTAG CCGCCGTCTT GCTCAAAACC
TGA
|
|---|
| Protein sequence | MTPSSAFQLS NPEGLYDPSG NAYSHVAEVR ADSRLLFIAG QGGEDSQGQL SPVFAEQARQ
ALANLKRALA SKGASLAQVF KLTLLIVEHS EARLHQWVAE ADRAWGAHMK PTCTLIPVPR
LALDGMLVEI EAVAAVLLKT
|
|---|
| |