Gene Pput_2235 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2235 
Symbol 
ID5191969 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2544917 
End bp2545315 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content61% 
IMG OID640586692 
ProductMerR family transcriptional regulator 
Protein accessionYP_001267558 
Protein GI148547456 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACTC AGACCTACAG CATCTCCGAC CTGTCCCGCG AACTGGACAT CACCACCCGC 
GCTATCCGCT TCTACGAAGA ACAGGGCCTG CTCAGCCCTG AGCGTCGCGG GCTGGAACGT
ATCTACTCAC CGCGCGACAA GGTCAGCCTG AAGCTCATCC TGCGCGGCAA GCGCATTGGC
TTTTCCCTGG CCGAGTGCCG CGAGTTGATC GAACTGTATG ACCCCACCAG CGGCAACCTC
AAACAGCTCA ACAGCATGCT GGCGAAGATT GCCGAGCGCC GCGCCCAGCT GGAGCAGCAG
ATGCTGGACA TCCACCAGAT GCAACTGGAA CTGGACACCG CCCAGGAGCG CTGCGAACAA
GCCCTGGCCG CCACCCTGAA CAACAAAGAC AACCGCTGA
 
Protein sequence
MSTQTYSISD LSRELDITTR AIRFYEEQGL LSPERRGLER IYSPRDKVSL KLILRGKRIG 
FSLAECRELI ELYDPTSGNL KQLNSMLAKI AERRAQLEQQ MLDIHQMQLE LDTAQERCEQ
ALAATLNNKD NR