| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2229 |
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| Symbol | |
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| ID | 5191321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2537834 |
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| End bp | 2539495 |
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| Gene Length | 1662 bp |
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| Protein Length | 553 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586686 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001267552 |
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| Protein GI | 148547450 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.638317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCCAG ATACGCTTGC GTCCTTTGCC CAGTTGCAAG CGCGTGTCGC AGAACTGGAA
GCACGCCTGG CAGAGCGCGA AGACAGCGTC CAGGCGCATG ACAGGCTGCT TGGAGAACTG
CTCGACAACA GCCCGGCCAA CGTGTTTGCT GCCGACCGCA GGATGCGCCT GTTGGCCATC
AACCGCACGG CGCGCGAAAC CTTCGAACGT TACCGAGGCT TCGTGCCGCA GATTGGCGAC
TACGTACCCC AGTTCCTGAC CGATCAACCC GACATCATGG GCCGCCTGGC CCCGATATGG
CCGCGCATAC TGGCAGGGGA AGCGTTCATC GACACCGTCA CCTTCGGGCT GGACGACGCA
CCACGCCACT ACGAAATTCG CTACCACCCG TGGCTCGATG CTCAGCAGCG AATTCAGGGC
GGCTACCTGT TCGCCTATGA CATCACGCAG CGCGTGACCG AACAGGAACG CCTGCAGCAG
GCCGAAGAAG CACTGCGCCA GGCGCAGAAG ATGGAGGCGG TCGGCCAGTT GACCGGCGGG
ATTGCCCATG ACTTCAACAA CCTGCTGGCC AGCATCCTTG GCGCCCTGGA ACTGGCCGGG
CAACGTCTGG TGCAGCAACG CCTGGCGGAC ACTGCGCAGC TGCTTGAACT CAGCCGGCAC
AACGCCCAAC GCGCCGCAGC CTTGGTGCAG CGCTTGCTGG CATTCTCACG GCAGCAGACG
CTGGTCCCGC AACGGGTCGA TGTGCAGCAA CTGGTGGCCG GTATGCACGA CCTGATCAGC
AGTTCCACCG GCCCCTATGT CGACTACCAA GACCAGACAC ATGCCGGACT CTGGCCTATC
CGAATAGACG CACAGCAACT GGAAAACGCG CTGCTCAACC TGTGCATCAA CGCCCGTGAC
GCCATGCCGC TTGGCGGCAC CTTGAGCATC GGTTGCGCCA ATGTCGACGT GCAAGGCGCC
GAAGCCAGAC AGCGGGGCCT GGCCGCTGGC CAGTTTCTGC GTATCCGCGT TGAAGACACC
GGCATGGGCA TGTCCAAAGC AGTGATGCAG CGCGCCCTTG AGCCCTTCTT CACCACCAAG
CCGCTCGGCC AGGGCACTGG CCTTGGGCTG TCCATGGTCT ACGGCTTTGT GCGGCAATCC
GGTGGCCAGG TGGTCATCGA TAGCACGCCT GGCCAGGGTA CGGCCATCAG CCTGTATCTC
CCCTGCGATG AAAGCATCGC CGCCGCTTCA CCCAGCCCCC ACGTCGAAGG GCCTGCCCCT
GCGGCCTCAC ATCAGCGGCG CGTGTGCAAG GTGATGCTGG TGGAAGACGA GCCGGCCCTG
CGCCTGGTCA TACTGGAGGT ATTGCTGGAC CAGGGCCATG AAGTTCAGGC ATTCGAAGAT
GGCCGCCAGG CCTACAAGGC CTTGCAGGAA GCCCCTGCGC CGGACTTGCT GATCACCGAT
GTCGGCCTGC CAGGGGGTAT CGATGGCTAC CAACTCGCGG ACGCCTGCCG AGCTAGTGCA
CCCCATGCCG CGGTGCTGCT GATCACAGGC TATGACCTTG CACACAGTAC GGCAAATGCG
CGACCCAACC GGCGTACCGA ACTGCTGGCC AAGCCATTCG ATCTTCAAGC ACTTGCCCAG
GCGCTTGAAC GGCTGCTGGG GAGCACCGCC CAGTCGCACT GA
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| Protein sequence | MQPDTLASFA QLQARVAELE ARLAEREDSV QAHDRLLGEL LDNSPANVFA ADRRMRLLAI
NRTARETFER YRGFVPQIGD YVPQFLTDQP DIMGRLAPIW PRILAGEAFI DTVTFGLDDA
PRHYEIRYHP WLDAQQRIQG GYLFAYDITQ RVTEQERLQQ AEEALRQAQK MEAVGQLTGG
IAHDFNNLLA SILGALELAG QRLVQQRLAD TAQLLELSRH NAQRAAALVQ RLLAFSRQQT
LVPQRVDVQQ LVAGMHDLIS SSTGPYVDYQ DQTHAGLWPI RIDAQQLENA LLNLCINARD
AMPLGGTLSI GCANVDVQGA EARQRGLAAG QFLRIRVEDT GMGMSKAVMQ RALEPFFTTK
PLGQGTGLGL SMVYGFVRQS GGQVVIDSTP GQGTAISLYL PCDESIAAAS PSPHVEGPAP
AASHQRRVCK VMLVEDEPAL RLVILEVLLD QGHEVQAFED GRQAYKALQE APAPDLLITD
VGLPGGIDGY QLADACRASA PHAAVLLITG YDLAHSTANA RPNRRTELLA KPFDLQALAQ
ALERLLGSTA QSH
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