| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2216 |
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| Symbol | |
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| ID | 5190960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2518765 |
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| End bp | 2519781 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586673 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001267539 |
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| Protein GI | 148547437 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2113] ABC-type proline/glycine betaine transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.228946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGAT TTCCAGCGCT GCTGGCCGGG CTGCTGTTGA CGGTGGGCCT GGCCAGCACG
GACAGCGCCG CATCGGCAGA ACAGCCTGCG CCTATCCATT TTGGTGCCAT CGGCTGGGAA
AGCGGCGCCC TCACCACCGA GATCCTGCGC CTGATCGTGG AGCGCGGCTA CGGCTACAGC
ACCGACACCC TGCCTGGCAG CACGGTCAGC ATGGAGGTGG CCCTGGCGCG CAATGACCTG
CAAGTGATCG CCGAGGAATG GGCCGGGCGC AGCCCTGCCT GGGTCAAGGC CGAACAGGCC
GGCCAGGTAT TCGCACTGGG CGATACGGTC AAAAATGCAG AGGAAGGTTG GTGGGTACCG
GCCTATGTGA TCGAGGGCGA TGCCGCACGC AACCTGAAGC CCGTGGCGCC TGAGCTGCAC
AGTGTCGAGG ACCTCAAGCG TTACCCGCAG GTATTTTCTG ACCCCGAATC GCCCGGTAAA
GGGCGTTTTC TCAACAGCCC AAGCGGCTGG ACGTCTGAAA CTGTCAACAG CCAAAAGCTC
AAGGCCTATG GCCTGGATGG CCTCTACAAC AACTTCCGCA GTGGCTCCGG CGCCGCGATG
GACGCCGAGA TCGGTTCGGC TATCCGGCGC GGCAAACCTG TGCTGTTCTA CTACTGGAAC
CCGACCCCGC TGATGGGGCG CTACAAGCTC ATCCGGCTGG AAGAACCCCC GTTCGATGCC
CAGGCCTGGG CCACCCTCAC CGACCCCGCC AACCCCAACC CGAAAGGCAG CCGCTCGCTG
CCGGCAAAGT TGTCGATTGG CGTGTCCAAA GCCTTTCGCG AAAACTACCC AGACCTGGTC
AGCGTGTTCG AACAGGTCAA CCTGCCCATC GATCGCCTGA ACAAGGCCCT GGCCGTCATG
AGCGAAAAAC GCACGCCCCC GCGCGAAGCC GCCCTCACCT TCCTGCGCGA TCACCGCGAG
GTGTGGAAAA CCTGGCTGCC GGCGGACATC GCCGCCAAGG TCGAGGCCAG CCTGTGA
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| Protein sequence | MKRFPALLAG LLLTVGLAST DSAASAEQPA PIHFGAIGWE SGALTTEILR LIVERGYGYS
TDTLPGSTVS MEVALARNDL QVIAEEWAGR SPAWVKAEQA GQVFALGDTV KNAEEGWWVP
AYVIEGDAAR NLKPVAPELH SVEDLKRYPQ VFSDPESPGK GRFLNSPSGW TSETVNSQKL
KAYGLDGLYN NFRSGSGAAM DAEIGSAIRR GKPVLFYYWN PTPLMGRYKL IRLEEPPFDA
QAWATLTDPA NPNPKGSRSL PAKLSIGVSK AFRENYPDLV SVFEQVNLPI DRLNKALAVM
SEKRTPPREA ALTFLRDHRE VWKTWLPADI AAKVEASL
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