| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2205 |
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| Symbol | |
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| ID | 5194078 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 2507104 |
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| End bp | 2509521 |
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| Gene Length | 2418 bp |
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| Protein Length | 805 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586662 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_001267528 |
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| Protein GI | 148547426 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03074] membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.596534 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGAAA CACCGCGCGC CTCTGGCGCC ACACACTTCA TCCTCGTCGG CCTGGGCGTG
ATCATCGCCC TGCTCGGCCT CCTCCTCGCT GCTGGCGGCG TCAAGCTCGC CGGTCTGGGC
GGTTCCTGGT ACTTCCTGAT CGGCGGCTTG GCCATGGCCA TCGCCGGTGT CCTCATTGCT
CGCCGCAAGA AGGCGGGCGC CTGGCTGTAT GCCGTATTCC TGGTCGGTAC TGCCATCTGG
GCACTGATCG ATGCCGGCCT GGTGTTCTGG CCGCTGTTCT CGCGCCTGTT CATGTTCGGC
GCAATCGGCA TGGTCGTGGC GCTGGTTTAC CCGCTGCTGG CGCGTGCCAA CGGCGCCAGC
GCCGGGCGCG GTGCGTACGG CGTAGCCGGG GTAATGGCCG TGGTACTGGT GATCGCGGTC
GGCAACATGT TCGTTGCCCA CCCAAGCGTC GCCCCCACCG GCAAGGGCCC GGGCATGACC
CCGGTCGAAG CCGGCAAGGA ACAGAAAGAC TGGGCCCACT ACGGCAACAC CGAAGGTGGC
AGCCGCTTCG CCGCGCTGGA CCAGATCAAC CGTGACAACG TCAACAAGCT GAAAGTGGCC
TGGACCTACC ACACCGGCGA CGTCGCGATC AGTGACGGCA ACGGTGCCGA AGACCAGCTC
ACCCCGCTGC AGATCGGCAG CAAGGTGTTC ATCTGCACCC CGCACAACAA CCTGATCGCA
CTCGATGCCG ACACCGGCAA AGAGCTGTGG AAGAACGAAA TCAACGCCCA GTCCAAGGTC
TGGCAGCGTT GCCGTGGCAT GGCCTATTTC GACGCCACTG CTGCCATCGC CCAGCCAACC
CAGCCGAACA GCTCGCCGAT CACCGGCGTT AGCGTAGCGG CCGGTGCCAA CTGCCAGCGT
CGCCTGCTGA CCAACACCAT CGACGGCCGC CTGATTGCCG TCGACGCTGA CAACGGCGAG
TTCTGCCAGG GCTTCGGCAA CAATGGCCAG GTCGACCTCA AGGCCGGCCT GGGTGATGTA
CCGGACTCTT ACTACCAGCT GTCCTCGGCA CCGCTGATGG CCGGCACTAC CGTGGTGGTC
GGCGGCCGTG TTGCCGACAA CGTCCAGACC GACATGCCTG GCGGCGTGAT CCGTGGTTTT
GACGTGATCA CCGGTGAAAT GCGCTGGGCC TTCGACCCGG GCAACCCGGA AGATCGCCAG
GCACCACAGG CCGACAGCAC CTACGTGCGC AGCACCCCGA ACAGCTGGGC GCCGATGTCC
TACGACCCGG CGATGAACAC CGTGTTCCTG CCCATGGGTT CGTCGTCCAC CGACATCTAC
GGCGTAGAGC GCAGCAAACT GGACCACACT TACGGCGCTT CGGTGCTGGC TCTGGACGCC
ACCACCGGCA ACCAGAAATG GGTGTTCCAG ACCGTGCACA ATGACCTCTG GGACTTCGAC
CTGCCCATGC AGCCAAGCCT GATCGACTTC ACCAAGGACG ACGGCCAGTC GGTACCTGCG
GTGGTGATCG GCACCAAGGC TGGGCAGATC TACGTGCTCG ACCGCGCCAC CGGCAAGCCG
CTGACCCAGG TCGACGAGGT ACCGGTCAAG CCAAGCAACA TCCCGAACGA GCCGTACTCT
CCTACCCAGC CCAAGTCGGT GGGCATGCCG CAGATCGGCG CGCAGACCCT GACCGAATCG
GACATGTGGG GCGCCACCCC GTATGACCAA CTGCTGTGCC GCATCGACTT CAAGAAGATG
CGCTACGACG GCCTGTACAC CGCGCCGGGT ACCGACCTGT CGCTGAGCTT CCCGGGTTCG
CTGGGTGGCA TGAACTGGGG CAGCATTTCT ACCGACCCGG TACATGGCTT CATCTTCGTC
AACGACATGC GTCTGGGCCT GTGGATCCAG ATGATCCCGT CGCAGAACAA AGGTGGCGCG
GCTTCCGGTG GCGAAGCACT GAACACTGGC ATGGGCGCGG TACCGCTCAA GGGCACCCCG
TATGCCGTGA ACAAGAACCG CTTCCTGTCG GTCGCCGGCA TTCCATGCCA GGCACCGCCG
TTCGGCACCC TGACCGCCAT CGACATGAAG ACCCGCCAGG TGGCCTGGCA GGTGCCGGTC
GGCACCGTTG AAGACACCGG CCCGCTCGGC ATCCGCATGC ACCTGCCGAT CAAGATCGGC
CTGCCAACCC TTGGCGGCAC CCTGTCGACC CAAGGCGGCC TGGTGTTCAT CGCCGGCACC
CAGGACTTCT ACCTGCGTGC CTACGACAGC AGCAACGGTA ACGAAATCTG GAAGGCTCGC
CTGCCAGTAG GCAGCCAGGG CGGCCCGATG ACCTACGTCT CGCCGAAGAC CGGCAAGCAG
TACGTGGTGA TCACCGCTGG CGGCGCCCGC CAGTCGACTG ACCGCGGCGA CTATGTGATT
TCTTACGCTC TGCCGTAA
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| Protein sequence | MKETPRASGA THFILVGLGV IIALLGLLLA AGGVKLAGLG GSWYFLIGGL AMAIAGVLIA
RRKKAGAWLY AVFLVGTAIW ALIDAGLVFW PLFSRLFMFG AIGMVVALVY PLLARANGAS
AGRGAYGVAG VMAVVLVIAV GNMFVAHPSV APTGKGPGMT PVEAGKEQKD WAHYGNTEGG
SRFAALDQIN RDNVNKLKVA WTYHTGDVAI SDGNGAEDQL TPLQIGSKVF ICTPHNNLIA
LDADTGKELW KNEINAQSKV WQRCRGMAYF DATAAIAQPT QPNSSPITGV SVAAGANCQR
RLLTNTIDGR LIAVDADNGE FCQGFGNNGQ VDLKAGLGDV PDSYYQLSSA PLMAGTTVVV
GGRVADNVQT DMPGGVIRGF DVITGEMRWA FDPGNPEDRQ APQADSTYVR STPNSWAPMS
YDPAMNTVFL PMGSSSTDIY GVERSKLDHT YGASVLALDA TTGNQKWVFQ TVHNDLWDFD
LPMQPSLIDF TKDDGQSVPA VVIGTKAGQI YVLDRATGKP LTQVDEVPVK PSNIPNEPYS
PTQPKSVGMP QIGAQTLTES DMWGATPYDQ LLCRIDFKKM RYDGLYTAPG TDLSLSFPGS
LGGMNWGSIS TDPVHGFIFV NDMRLGLWIQ MIPSQNKGGA ASGGEALNTG MGAVPLKGTP
YAVNKNRFLS VAGIPCQAPP FGTLTAIDMK TRQVAWQVPV GTVEDTGPLG IRMHLPIKIG
LPTLGGTLST QGGLVFIAGT QDFYLRAYDS SNGNEIWKAR LPVGSQGGPM TYVSPKTGKQ
YVVITAGGAR QSTDRGDYVI SYALP
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