| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2097 |
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| Symbol | |
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| ID | 5193198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2372863 |
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| End bp | 2374068 |
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| Gene Length | 1206 bp |
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| Protein Length | 401 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640586554 |
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| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
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| Protein accession | YP_001267420 |
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| Protein GI | 148547318 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.531754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGCATGG ATGACTGCTG TTCTTCTTCT TCGCGTCGTG ACTTCCTCAA GCTCGGCGCC
ATGCTCACTG CTGCCGGTGC ATTGCCGTTG CTGTCGAGCT TGCAGGCGCG TGCCGCTGCC
GAGCCGGACG CGCCGGTGCG CATCGGCTAC CTGCCGATCA CCGATGCCAC GCCGCTGCTG
GTGGCACATA ACAACGGCTT GTTCGAGGCC GAAGGCATCC AGGCCGAGCG CCCGGTGCTG
CTGCGCAGCT GGGCGCAGGT GATCGAGGCC TTCATTTCCG GCCAGGTCAA TGTCATCCAC
CTGCTTTCGC CGATGACAGT ATGGGCGCGC TATGGCAGCA AGGTGCCAGC CAAGGTGGTG
GCCTGGAACC ACGTGGGCGG TTCGGGCCTG ACTGTAGCGC CGGATATATC CGACGTGAAA
CAGCTCGGTG GCAAGACAGT GGCCATTCCG TTCTGGTACT CGATCCACAA TGTGGTACTG
CAACAGTTAC TCAACGACAA CGGCCTGACG CCAGTGTCGA AGCCGGCCAA TGCGCAACTG
GCCGCCAACG AGGTCAACCT GCTGGTGCTG CCACCGTCCG ACATGCCACC GGCTCTGGCC
AGCAAGCGCA TTGCCGGCTA CATCGTTGCC GAACCGTTCA ACGCACTGGC CGAGAACCTC
AAGGTGGGCC GCGTGCAGCG CTTTACCGGC GATGTATGGC GCAACCATGC GTGCTGCGTG
GTGTTCATGC ACGAGCATGA CCTGAATAAC CGCCCGGAAT GGTCGCAGAA AGTGGTCAAC
GTCATCGTCA AGGCCCAGCA ATGGACCCGT GACCATCGCA CCGAAGCCGC CGCACTGCTG
TCCCGGGCGG GCCCCAACAA GTACACCCCG CACGAGCCTG CGGTGCTGAC CAAGGTCCTG
GCGCCCGCCG CCGAAGACCG TGCTGGCTAC ATTGCCAGTG GTGCCATTCG CCATCAGCAG
TGGGACGAAA AGCGCATCGA CTTCCAGCCA TACCCGTTCC CGAGTTACAC CGAAGAGCTG
GTCAAGCGCC TGAAAACCAC CCTGATCGAA GGCGACAATG CCTTCCTTGC CGGGCTGGAT
CCGGCGTATG CCGCCCGCGA CCTGGTCGAC GATCGCTTCG TGCGTAATGC CATCGCGACA
GTGGGTGGCC CGTCGGTGTT CGGCATTGCC GACAACTTCG AGCGTAGCGA GGAGTTTGCG
GTCTGA
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| Protein sequence | MCMDDCCSSS SRRDFLKLGA MLTAAGALPL LSSLQARAAA EPDAPVRIGY LPITDATPLL
VAHNNGLFEA EGIQAERPVL LRSWAQVIEA FISGQVNVIH LLSPMTVWAR YGSKVPAKVV
AWNHVGGSGL TVAPDISDVK QLGGKTVAIP FWYSIHNVVL QQLLNDNGLT PVSKPANAQL
AANEVNLLVL PPSDMPPALA SKRIAGYIVA EPFNALAENL KVGRVQRFTG DVWRNHACCV
VFMHEHDLNN RPEWSQKVVN VIVKAQQWTR DHRTEAAALL SRAGPNKYTP HEPAVLTKVL
APAAEDRAGY IASGAIRHQQ WDEKRIDFQP YPFPSYTEEL VKRLKTTLIE GDNAFLAGLD
PAYAARDLVD DRFVRNAIAT VGGPSVFGIA DNFERSEEFA V
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