Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2081 |
Symbol | |
ID | 5194998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2357777 |
End bp | 2358529 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640586539 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001267405 |
Protein GI | 148547303 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCC AGCCACTCGA CGACAGCTTC AAGGTCAACC GCAATCCCGT TACTCTGCGC GAAATCGTGC TCGACAAGCT GCGCGCCGCT ATCATGAACT TTCACCTGCT GCCCGGCGAC CGCCTGGTCG AACGCGACCT GTGCGACCGT CTCGGCGTCA GCCGCACTTC GGTACGTGAA GCGCTGCGTC ACCTGGAGTC CGAAGGCCTG GTGGAGTTCG CCGACGCCAA AGGCCCACGC GTGGCCATCA TCACCCTGGA AGACGCACGT GACATCTATG AGCTGCGCTG TGTGCTCGAA GGCCTGATCG TGCAACTGTT CACCCTCAAC GCCAAGGCCA AGGACATCCG TGCGCTGGAA CGCGCGCTGG AAGTGAACCG CGAGGCACTG GAAGAAGGTG AGCTGCAACA GGTACTGGAT TCGGTACAAG GTTTCTACGA TGTGCTGCTG GAAGGCTCCG GCAACCAGGT GGCGGCCCAG CAGTTGCGCC AGTTGCAAGC ACGCATCAGC TACCTGCGCG CCACCTCGGT ATCGCAGGAA AACCGCCGCG GCGCCAGCAA CCGCGAAATG GAAAAGATCG TCGAGGCAAT CAAGAGCGGT GACCCGCTGG TAGCCCACCA GGCCTCGGTC GACCACGTCC GCGCCGCCGC CAAGGTGGCC TTGGACTACC TGCGCCAGAA GCAGGATGAC AACGCCAAGG TGCGCGACAT TGTCGAACCC TTGGCCCTGA AGGAACCCCG CATAGGTCGC TGA
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Protein sequence | MKRQPLDDSF KVNRNPVTLR EIVLDKLRAA IMNFHLLPGD RLVERDLCDR LGVSRTSVRE ALRHLESEGL VEFADAKGPR VAIITLEDAR DIYELRCVLE GLIVQLFTLN AKAKDIRALE RALEVNREAL EEGELQQVLD SVQGFYDVLL EGSGNQVAAQ QLRQLQARIS YLRATSVSQE NRRGASNREM EKIVEAIKSG DPLVAHQASV DHVRAAAKVA LDYLRQKQDD NAKVRDIVEP LALKEPRIGR
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