Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2075 |
Symbol | |
ID | 5194243 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2351185 |
End bp | 2352597 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640586533 |
Product | permease for cytosine/purine, uracil, thiamine, allantoin |
Protein accession | YP_001267399 |
Protein GI | 148547297 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1457] Purine-cytosine permease and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGTG CAGCCAATTC GGCACCCCTG ATAGAAAAAC ACACGATCGG CTACGTGCCC CCGCAAGACC GCCATGGAAA GGTAAGGGAT CTGTTCACAC TCTGGTTCGG CGGCAACATC GCGCCGTTGC CCATCGTCAC CGGCGCGCTG GGTGTGCAGC TGTTCCACCT GAACCTGGTA TGGGGCATCG TCGCCATCCT CGTCGGTCAC CTGGTCGGCG GGGTGCTGAT GGCCCTGCAC TCGGCCCAGG GCCCGCAAAT GGGCATTCCG CAGATGATCC AGAGCCGCGC CCAGTTCGGC ACCCTCGGCG CGCTGCTGGT GGTGGTGATC GCCGGCGTCA TGTACATCGG TTTCTTCGCT TCCAACATCG TCCTTGCCGG CAAGTCACTG CATGGCGTGG TCGACGCCGT TCCGGTACCG GTGGGCATCG TCATCGGTGC GTTGGGTTCA GGCATCATCG GCATCATCGG CTACCGCTTC ATCCACGTGC TCAATCGCAT TGGCACCTGG GTACTGGGTA TCGGTATCGT GGTTGGCTTC GGCTACATCT TCACCCATGT GCAGAGCGAC GATTTCCTCA CCCGCGGCGG CTTCAACCTG GCCGGCTGGC TGGCCACCGT GTCGCTGGCG GCGTTGTGGC AAATCGCCTT TGCGCCCTAT GTGTCGGACT ACTCGCGCTA CCTGCCGGCA GATGTCAAAG TCAGCTCGAC CTTCTGGACC ACCTACCTGG GCTCGGCCCT GGGTTCAAGC CTGTCGTTCA TCTTCGGCGC CGTGGCCGTG CTGGCGATCC CGGCCGGCAT GGACACCATG GACGCGGTCA AGCTGGCCAC CGGCACGCTC GGCCCGATCA TGCTGGTGCT GTTCCTGCTC AGTGTGATCA GCCATAACGC CCTCAACCTG TATGGCGCGG TGCTGTCGAT CATCACCCTG GTGCAAACGT TCGCCTACCG CTGGATCCCC ACCGCCAAAA GCCGTGCAGT GCTGTCGCTG ATCGTGCTGT CGGCCTGCTG CGTGGTAGCG GTGTTCGCTT CGGCAGACTT CATCGGCCAC TTCGTTGACA TGGTGCTGGT ACTGCTGGTG GTGCTGGTGC CGTGGACGGC GATCAACCTG ATCGACTTCT ACGCCATTCA CAAAGGTGAC TACGACATCC AGTCGATCTT CCAGGTCGAT GGTGGGATCT ATGGGCGCTA CAACCCGCAG GCCCTGATCG CCTACGCTGT GGGTATCGTG GTGCAGATAC CGTTCATGAA CACCCCGCTG TACGTCGGGC CGATTTCCGA GCACATCAAC GGGGCTGACC TGTCGTGGCT GGTAGGGTTG GCGATCACCT CGCCGCTGTA CTGGTGGCTG GCGAGCCGAG ACAGTGCCTA CCGTCGTCGG CAGACCAGCG CCAAGCTGGC AGCAGTGGCT TGA
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Protein sequence | MTSAANSAPL IEKHTIGYVP PQDRHGKVRD LFTLWFGGNI APLPIVTGAL GVQLFHLNLV WGIVAILVGH LVGGVLMALH SAQGPQMGIP QMIQSRAQFG TLGALLVVVI AGVMYIGFFA SNIVLAGKSL HGVVDAVPVP VGIVIGALGS GIIGIIGYRF IHVLNRIGTW VLGIGIVVGF GYIFTHVQSD DFLTRGGFNL AGWLATVSLA ALWQIAFAPY VSDYSRYLPA DVKVSSTFWT TYLGSALGSS LSFIFGAVAV LAIPAGMDTM DAVKLATGTL GPIMLVLFLL SVISHNALNL YGAVLSIITL VQTFAYRWIP TAKSRAVLSL IVLSACCVVA VFASADFIGH FVDMVLVLLV VLVPWTAINL IDFYAIHKGD YDIQSIFQVD GGIYGRYNPQ ALIAYAVGIV VQIPFMNTPL YVGPISEHIN GADLSWLVGL AITSPLYWWL ASRDSAYRRR QTSAKLAAVA
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