| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2029 |
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| Symbol | |
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| ID | 5190659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2293060 |
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| End bp | 2295519 |
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| Gene Length | 2460 bp |
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| Protein Length | 819 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640586487 |
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| Product | hypothetical protein |
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| Protein accession | YP_001267353 |
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| Protein GI | 148547251 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component
[COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.349708 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTT TGTCGCTGGC CCTGTTGGCG CTGCTCAGCC ACTGGCGGCG CCATCGTGTG
CAGTGCTTCA GCATCTTCAC TGGCCTGTGG CTGGCCACGG CGCTGTGGAC CGGTGTGCAG
GCATTGAACA GCCAGGCACG CAGCGACTAT GCCCGGGCCA GCGCGGTATT GACCGGGCCG
TTGCAGGCGC AACTGATCGC GCGCAATGGC GAGCGCTTCG ATCAGGCGTT GTACGTGCAA
CTGCGCAGGC AGGGCTGGGC TGTTTCGCCG GTGCTGGAAG GGCGCTTGCG CTTGCCGGGC
GAGCCCGCAC GCAGTGTGCG ACTGATCGGT ATCGAGCCGT TGAGCCTGCC GCCTGCCAGC
AGCATTGCCG GGGTGCAGGT GCAGGCATTC GACCTGCAAG CGTTCATCGG CACGCCCGGG
CAAGCCTGGG TTGGGCCAGA CACCTTGCGT CAACTGAACA CAAGCCCCGG GCAGCCGACC
CGCGACAGTG AAGGGCAGTT GCTGCCGCCT ATGGTTTTGC AGCCTGCGTT GGCACCCGGG
GTCATCGTGG TGGACATCGG CCACGCGCAG GCGTTGCTGA ACGCACCGGG GCAGTTGTCT
CGTCTGCTGC TGGCTGATAC GCCCGGGCCG TTGCCTGCGG ATATTGCCCG CCACCTTGAA
CTGCAGCCGC GGCAGGACGA TGGCGGCTTG CAGCGCCTCA CCGACAGTTT CCACCTCAAC
CTGACCGCCC TCGGCCTGCT GGCGTTCGTT GTCGGCTTGT TCATCGCCCA CGCCGCGATC
GGTCTGGCGC TGGAGCAGCG CCGTGGGCTG ATCCGCAACC TGCGCGCGTG CGGCATCAGC
CTGAAGACCC TGCTGGGTGC CCTGGTGCTG GAGCTGGGCC TGTTCGCGGC AGTGGGTGGG
CTGGCCGGGG TGGCCAGTGG TTACGCATTG GCCGCGTGGC TGTTGCCCGA CGTGGCCGCC
AGCCTGCGTG GTCTGTATGG CGCCCAGGTC GCCGGCACGT TGAGCCTGCC GGCGGGGTGG
TGGCTGCTGG GTGTGCTGGT AAGTGTCCTC GGGGCATTGC TGGCCGGGCT GCAGAGTGTA
ATGCGCGCTG CCCGGTTGCC TTTGCTGGCG CTGGCGCAAC CCCAGGCCTG GCGACTGGCG
CAGGGGCCGT GGTTGCAACG GCAGGCTTTG CTAGCGGGCC TGCTGCTGTT GCTGGCCTTG
GGCTGTGGTG TCTTCGGGGC TGGCCTGCTT AGCGCGTTCG GCATGCTGGC AGGGTTGTTG
CTGGCGGCGG CGCTGCTGTT GCCGGCCTTG CTCGATCGGG TACTGGCGTG GCTGGCGCGT
CGTTGCCACC GGCCATTGGC GCAATGGTTC GTGGCTGACA GCCGCCAGCA GCTGCCAGCC
TTGAGCCTGG CGTTGGTCGC CCTCTTGCTG GCGCTGGCTG CCAGTGTTGG CGTGGGCAGC
ATGACCGAGG GTTTTCGCAA GACGTTTGTC GGTTGGCTTG ACCTGCGCCT CTCTGCCGAC
CTGTATGTCA CCCCGCGGGA CACGGCCCAA GGCTTGCAGA TAGTCGAGTG GCTCAAGCAG
CAACCTGTGG CCAGCGTGGT CCTGCCCGGC TGGCGTGCAG ACATGCAGCT GCAAGGTTGG
CCGGTGCAAG TGCAGGGCAT TGTCGATCAC CCCGCCTATC GAACGCGCTG GCCATTACTG
GAACAGCATT CGCGCGCCTG GCAGCGACTG GCCAGTGGAC AAGCCGTGAT GCTCAGTGAG
CAGTTGGCCA GGCGCCTGAA CCTGCAACTG GGCGACAGCC TGCAGCTGCC CGCAGACACG
CCAGCCTTGC CCGTGGTCGG GATCTACGCC GATTACGGCA ACCCCAAGGG GCATGTACTG
GTCAATGCCG GCTGGTTGCG CGCCCACTGG CCACAGGCAA CCCTGGCCGG CTTGAGTGTC
GACCTGAGCG TTGAAGGGGT GGCATCGCTC AAGGCCGCGC TGCAACAGCA CTTTGCCCTG
GATGACAGCC GGGTGGTCGA GCAGGCGCGC CTGAAACGCT GGTCAACCGA CGTCTTCAAC
CGCACCTTTG CCGCCACCGC AGCCCTCAAC AGCCTTACCC TTGGCGTGGC TGGTGTGGCG
TTGTTCATCA ACCTGCTGAC CCTGGGCCAG GCCCGGCTGG GCCAGTTGGC ACCGCTGTGG
GCGCTGGGGG TGCGGCGCAT GCAACTGGTC TGGCTGAGCC TCGGGCAGAC ACTCATGCTA
AGCAGCTTCA CCGTGTTGCT GGCAATCCCG CTTGGGCTGT TGCTGGCCTG GTGCCTGGTC
GCGGTGGTGA ACGTGCAGGC ATTCGGCTGG CGTTTACCGC TGTATGTGTT CCCCATGCAA
CTGCTGCAGC TGACCGTGCT GGGCATGCTC ACCAGCCTGA TCGCCTGTGC CTGGCCGCTG
TGGCAGCTGG CGCGCCGCCA GCCGCGCGAA CTGTTGAGGC CGTTGGCCGA TGAAGCTTAA
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| Protein sequence | MKLLSLALLA LLSHWRRHRV QCFSIFTGLW LATALWTGVQ ALNSQARSDY ARASAVLTGP
LQAQLIARNG ERFDQALYVQ LRRQGWAVSP VLEGRLRLPG EPARSVRLIG IEPLSLPPAS
SIAGVQVQAF DLQAFIGTPG QAWVGPDTLR QLNTSPGQPT RDSEGQLLPP MVLQPALAPG
VIVVDIGHAQ ALLNAPGQLS RLLLADTPGP LPADIARHLE LQPRQDDGGL QRLTDSFHLN
LTALGLLAFV VGLFIAHAAI GLALEQRRGL IRNLRACGIS LKTLLGALVL ELGLFAAVGG
LAGVASGYAL AAWLLPDVAA SLRGLYGAQV AGTLSLPAGW WLLGVLVSVL GALLAGLQSV
MRAARLPLLA LAQPQAWRLA QGPWLQRQAL LAGLLLLLAL GCGVFGAGLL SAFGMLAGLL
LAAALLLPAL LDRVLAWLAR RCHRPLAQWF VADSRQQLPA LSLALVALLL ALAASVGVGS
MTEGFRKTFV GWLDLRLSAD LYVTPRDTAQ GLQIVEWLKQ QPVASVVLPG WRADMQLQGW
PVQVQGIVDH PAYRTRWPLL EQHSRAWQRL ASGQAVMLSE QLARRLNLQL GDSLQLPADT
PALPVVGIYA DYGNPKGHVL VNAGWLRAHW PQATLAGLSV DLSVEGVASL KAALQQHFAL
DDSRVVEQAR LKRWSTDVFN RTFAATAALN SLTLGVAGVA LFINLLTLGQ ARLGQLAPLW
ALGVRRMQLV WLSLGQTLML SSFTVLLAIP LGLLLAWCLV AVVNVQAFGW RLPLYVFPMQ
LLQLTVLGML TSLIACAWPL WQLARRQPRE LLRPLADEA
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