Gene Pput_2012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2012 
Symbol 
ID5190901 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp2274129 
End bp2275325 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content68% 
IMG OID640586470 
Productmajor facilitator transporter 
Protein accessionYP_001267336 
Protein GI148547234 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2807] Cyanate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.579167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCTG TACTGAACCT GTTGCTGGTG ATCCTGCTGG CGTTGAACCT GCGGCCGATC 
CTGACCAGTA TCGGCCCGTT ACTCGAACCT ATGCGCGCCA GCACCGGCCT GGGTTACCAG
CAGGCCGCCT TGCTGACGGC GCTACCGGTG CTGTGCATGG GCCTGGTGCC CCTGTTGCAA
CCGTGGCTGC GACGCTGGGT CAGCGAGCAC GGCGGCATGC TTGGGGGCCT GACCGCCATT
GCCTTGGCCT GCCTGTGGCG CCTGCAACTG GACAGTGCCT GGGCGCTGAT CGCCAGTGCG
CTGGTCGCCG GCCTGGGCGT GGCGGTGGTG CAGGGCATGA TGCCGGGGCT GGTCAACCGC
TGGTTCCCTG GCCGTCTGGC CGGGGCGATG GGGCTGTACT CGGCGGCGCT GATGAGCGGC
GGCGGCTTGG CGGCAGTACT CGGTCCACAC ATCAGCGGCC ATTTCGGTTA CTGGCAGGCG
GGCCTGGGCG TTTGGGCGAT CCCGGCCGTG CTGGCGGTGC TGGCCTGGGC CGTGCTGCGG
CCAAGGCAGG AGGCGCCAAA GCTGTCTGGG GCCGCAGGCG GGCACTGGTT CGGCACCCGC
CGGGCGTGGT TGCTGGCCCT GTACTTCGGC CTGATCAACG GCGGCTACAC CAGCATGGTG
GCCTGGTTGC CGGCTTACCA CATCGAGCAC GGCGGCACCG CTCAGGGCGG TGCCGACCTG
GTGGGCCTGA TGACCGTCTT TCAGGTGCTC GGTGCGCTTG GCCTGCCGCT GCTGCTGCGA
CGTTGGGCCG ACAGGCGCCC GGGTTTGTGG CTGGCGCTGG CGATCCAGCT GGCGGGCTTT
CTGGGGCTTT TGCTGGCACC TGCGGCGGCT TCCGGGCTTT GGGTCGCCAT GATCGGCTTT
GGCTTGGGTG CCTGCTTCAG CCAGTGCCTG ACGTTGACCC TGGAACACCT GAAAACGCCT
GCCGAGGCCG GCAGCCTGGC GGCGTTCGTA CAGGGTATCG GCTTTATCAT CACCGGCATC
GTGCCGTATA TCACGGGTTG GCTGCGGGAT GTCAGTGGCG ACTTCCAGGC TTCGTGGACG
CTGTTGACCG TGACCGTGAT GGCAATGCTG CTGGTGACCG CGTGCTTCAA CCCGCGCGGC
TATGCGGCGG CTATCGCCCG GCCGGCCGCA ACCGGCAAGG CCGCACCGGT CAACTGA
 
Protein sequence
MSAVLNLLLV ILLALNLRPI LTSIGPLLEP MRASTGLGYQ QAALLTALPV LCMGLVPLLQ 
PWLRRWVSEH GGMLGGLTAI ALACLWRLQL DSAWALIASA LVAGLGVAVV QGMMPGLVNR
WFPGRLAGAM GLYSAALMSG GGLAAVLGPH ISGHFGYWQA GLGVWAIPAV LAVLAWAVLR
PRQEAPKLSG AAGGHWFGTR RAWLLALYFG LINGGYTSMV AWLPAYHIEH GGTAQGGADL
VGLMTVFQVL GALGLPLLLR RWADRRPGLW LALAIQLAGF LGLLLAPAAA SGLWVAMIGF
GLGACFSQCL TLTLEHLKTP AEAGSLAAFV QGIGFIITGI VPYITGWLRD VSGDFQASWT
LLTVTVMAML LVTACFNPRG YAAAIARPAA TGKAAPVN