| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1978 |
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| Symbol | |
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| ID | 5190203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2243393 |
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| End bp | 2244109 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640586437 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001267303 |
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| Protein GI | 148547201 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4973] Site-specific recombinase XerC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00595062 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGGAAGATG AATGGCGACT CCGTCGAGAC GCGGCGCTTC TGCTTCGAGC GGTATTGCGC
GATCTCTCTG GCCCTTGCCA GTGCGCCAAG AGCCCGGCTG TTCAACATTA CGGTGCGGGT
GTATTTCGTC TTGGTCCGCT CGACTGCCTG CTTTTCAACC ACGATCCGGC AGATGTGAGC
CGTCTTTTTC TCGACGTAAG GCTCCAAATC GCGGAGGAAA CTCGTGATTT AGCCCTTTTC
GATCTGGCCA TCGATAGCAA ACTACGAGCC TGCGATCTGA CCAAGCTTCG CGTACGCGAC
GTTGCTCATG GGGAGCACGT GTCATCGCGG GCGATAGTGA TGCAGCAGAA AACCCAATGT
CCCGTACAGT TTGAAATTAC AGAGCAAATG CGGCTGGCCC TACAGGCCTG GATACATCAA
GCCCAACTCC ACAGCGAGGA TTGTCTTTTC CCAAGCCGGC TACACGCCTC AGTGCATCTC
TCCACCCGGC AGTACGCCCG AATCGTCAAA GCGTGGATAA AGTCTATTGG GCTAGATCCT
GCTATGTACG GCACCCACAC GATGAGACGT ACAAAGGCAT CGCTGATCTA TCGCAGGACA
AAGAACTTGA GAGCAGTTCA GCTCCTGCTC GGCCATACAA AGCTTGAAAG CACGGTGCGA
TACCTGGGTA TTGAAGTCGA TGACGCATTG GAGATGGCAG AGCAGACGGA GGTCTGA
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| Protein sequence | MEDEWRLRRD AALLLRAVLR DLSGPCQCAK SPAVQHYGAG VFRLGPLDCL LFNHDPADVS
RLFLDVRLQI AEETRDLALF DLAIDSKLRA CDLTKLRVRD VAHGEHVSSR AIVMQQKTQC
PVQFEITEQM RLALQAWIHQ AQLHSEDCLF PSRLHASVHL STRQYARIVK AWIKSIGLDP
AMYGTHTMRR TKASLIYRRT KNLRAVQLLL GHTKLESTVR YLGIEVDDAL EMAEQTEV
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