| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_1959 |
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| Symbol | |
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| ID | 5193327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 2229243 |
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| End bp | 2230184 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640586420 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001267286 |
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| Protein GI | 148547184 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.070179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.335843 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACTCGT GGGAAAAAGC CGCTATAAAG TGTTTGACTG TCAGCAAGAA CGAGACAATG
AACCCTTACG AAGACATGCG GATCTTTGCC CAGGTGATGG AGGCCGGTAG TTTCACCGCT
GCCGCCGACC GTCTGGGCAT GTCCAAGCAA TCGGTCAGCC GGCGTCTGAT GCAGCTTGAA
GAGCGCCTGG GCGTGCGCCT GCTCAACCGC TCCACCCGGC GCCTCGATGC CACGCCACTG
GGGCAGCACT ACTACCAGTC GGCCCTGCGC CTGCTGGGTG AAGTGCAGCA GGTCGAACAC
GACATCAGCG GCCAGGCCCA GGTCCTGCGC GGCACCTTGC GCCTCAGCGC GCCGCTGTCG
TTTGCCATGG CGCACCTGGG TTGCCTGCTG ACCGAGTTTC TGCAGTTGCA CCCCCAGGTT
GATGTAGAAG TAGACCTGAG CGACCGCGCC GTGGACCTGA TTGGTGAAGG CTATGACCTG
GCGCTGCGGA TTGGTGCACT GGAGGACTCC AGCCTGATTG CCCGGCGTAT CGCCAGTGTC
GAGCGGGTCT ACTGTGCGAG CCCTGCGTAT TTGCAAGCAC GAGGAGCGCC GGGAAAACCG
GATGAGCTCG CCGCACATGA CTGCCTGCCC TATGGGCATT CGCGGCAGGT GCAGTGGCAG
TTCCACAAAG GTGGCAAAAC CCAGGCAATT CAGGTGACCG GGCGCATGCG GGCGAACAAT
GGCGAGTTGC TGCGGGGGGC TGCGATTGCC GGGATGGGGG TCACTTACCT GCCGACCTTT
ATCGTTGGGC AGGCGTTGGC GGAGGGGCAA CTGGTGACGG TTCTGGATGA GTGGCGCCCG
CCCGCGCTGC AGCTTTCGGC GGTGTATCCG CAGCACCGGC AGGTGGCGCG GCCGGTGCAG
GGTTTTGTCA GCTTCCTGCG TGCGCGGCTG GCGCAGCTCT GA
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| Protein sequence | MHSWEKAAIK CLTVSKNETM NPYEDMRIFA QVMEAGSFTA AADRLGMSKQ SVSRRLMQLE
ERLGVRLLNR STRRLDATPL GQHYYQSALR LLGEVQQVEH DISGQAQVLR GTLRLSAPLS
FAMAHLGCLL TEFLQLHPQV DVEVDLSDRA VDLIGEGYDL ALRIGALEDS SLIARRIASV
ERVYCASPAY LQARGAPGKP DELAAHDCLP YGHSRQVQWQ FHKGGKTQAI QVTGRMRANN
GELLRGAAIA GMGVTYLPTF IVGQALAEGQ LVTVLDEWRP PALQLSAVYP QHRQVARPVQ
GFVSFLRARL AQL
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