Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1943 |
Symbol | |
ID | 5193491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 2214284 |
End bp | 2215369 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640586404 |
Product | 2-nitropropane dioxygenase, NPD |
Protein accession | YP_001267270 |
Protein GI | 148547168 |
COG category | [R] General function prediction only |
COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCATT GGCCCGACCG CCGTATCCTT GATCTGCTGG GCATCGAGCT GCCCATTCTG CAGGCACCCA TGGCGGGGGC GACCGGCTCG GCCATGGCCA TCGCCGTGGG CCTGGCAGGT GGCTTGGGCG CCCTGCCCTG CGCCATGCTC AGCGGCGAAC AGGTGCGCGC CGAGATCGCT GCATTCCGCG CCGGCTGCCC GGGGCGCCCG CTGAACCTGA ACTTCTTCTG CCACCAGCCG CCAGCGCCCG ATGCCGAGCG CGATGCGCGC TGGAAGCAGG CACTTGAGCC TTATTACAGC GAAGTGGGCG CCGACTTCGC GGCGCCCACG CCGGTGTCCA ACCGTGCGCC TTTCGACGAG CAGAGCTGCC TGCTGGTCGA AGCGTTGCGC CCGGAGGTGG TGAGCTTCCA CTTCGGCCTG CCGCAGGCCG AACTGCTGCA GCGGGTAAAG GCCAGCGGTG CCAAGGTACT GTCCAGCGCC ACGACCGTGG AAGAAGCGGC CTGGCTGGAG CGCAATGGCT GCGATGCGAT CATCGCCATG GGCTATGAAG CCGGTGGCCA TCGCGGCATG TTCCTCAGCG ATGACATCAC CAGCCAGATA GGCACCTTCG CGCTCGTACC GCAGGTGGCC GATGCCGTCG GCGTGCCGGT GATTGCCGCC GGTGGTATCG GCGACCACCG CGGGCTGTTG GCGGCACTGG CCCTGGGTGC CTCGGCAGTG CAGATCGGCA CGGCTTACCT GTTCTGCCCC GAGGCCAAGG TGTCGCCAGC GCATCGCCGG GCGCTGGACA GCGCACCTGC CAGCGACACC GCGCTGACCA ACCTGTTCAC CGGCCGACCG GCGCGCGGCA TCAACAATCG CCTCATGCGC GAGCTGGGGC CGATGAGCGA GCTAGCACCG CGCTTCCCGC TGGCGGGCGG GGCATTGATG CCTTTACGGG CGATCACCGA TCCGCAGGGT AAGAGTGATT TCAGCAATCT GTGGTCGGGG CAGGCGTTAC GGCTGGGCCG GCACATGCCG GCGGGTGAGC TGACCCGGGA GATTGCCGGT AAGGCACTGG CAGTGATCGG TCACCAGGCA TTCTGA
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Protein sequence | MSHWPDRRIL DLLGIELPIL QAPMAGATGS AMAIAVGLAG GLGALPCAML SGEQVRAEIA AFRAGCPGRP LNLNFFCHQP PAPDAERDAR WKQALEPYYS EVGADFAAPT PVSNRAPFDE QSCLLVEALR PEVVSFHFGL PQAELLQRVK ASGAKVLSSA TTVEEAAWLE RNGCDAIIAM GYEAGGHRGM FLSDDITSQI GTFALVPQVA DAVGVPVIAA GGIGDHRGLL AALALGASAV QIGTAYLFCP EAKVSPAHRR ALDSAPASDT ALTNLFTGRP ARGINNRLMR ELGPMSELAP RFPLAGGALM PLRAITDPQG KSDFSNLWSG QALRLGRHMP AGELTREIAG KALAVIGHQA F
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