Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_1897 |
Symbol | |
ID | 5194049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 2172388 |
End bp | 2173854 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640586361 |
Product | major facilitator transporter |
Protein accession | YP_001267229 |
Protein GI | 148547127 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.134461 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCT GCTGTCCGGG TGGTCGCCCC GCAGGAGCAC TCGGGGTCTT CAGGCGCTGT CCAGGCTCGC CGCGTAGAAT GCGCGGCGTG CCCGGCGCGT CGAAAACTGC TGGCCTTAAA ACAACCACAA AGTCGCCCGC CAGGAGACAG GAAATGCCAA TTGCGAATGC AACCACGGTC CACAGTGACA TCGACCATGG CACGAAAGCG CTGTACAGCA AGATCACCTG GAGGCTCATC CCCTTCTTGT GTTTCTGCTA CCTCGCAGCT TATCTGGACC GCATCAATGT CGGCTTCGCG AAGCTGCAGA TGCTCGAAGA CCTGCAGTTC AGCACAGCGG CCTATGGCCT GGGTGCAGGG CTGTTCTTCG TCGGCTACAT CATCTTCGAA GTACCGAGCA ACCTGATCCT GCAGCGCGTT GGCGCCAAGC TGTGGATCGC CCGCATCATG ATCACCTGGG GCCTGCTGTC GGCCTGCACC CTGTTCGTCA CCAGCACCAC CCAGTTCTAT ATCCTGCGTT TCCTGCTGGG TGCGGCCGAG GCCGGCTTCC TGCCAGGCGT GTTGTACTAC CTGACCATGT GGTACCCCAC CTATCGCCGC GGGCGTATCA TTGCCCTGTT CATGATCGGG CTGCCGTTGT CGAGCGTGAT TGGCGGGCCG ATTTCTGGCT GGATCATGGG GCATTTCGAC CAGGTTCAAG GTTTGCATGG GTGGCAGTGG CTGTTCCTGC TGGAGGCGAT CCCCAGCGTT TTGCTCGGCA TCCTCACGTT CTGGGCATTG CCTAACCATT TTCAGCAGGC CAAGTGGCTG TCGGCTGACG ACAAGGCACA ACTGGCGGCA GACCTGGCCG CCGACGATGC CGAGGGCAAG GACAGCAAAC ACAGCTTCCG CGATGGCTTC TTCAACCTTA AGGTGTGGAT GCTCGGTGGT ATCGACTTTT CGATCCTGCT CAGCGCCTAT GCGATGGGCT TCTGGATGCC GACCTTCATC CGCGATGCGG GCGTCAGCGA CACCTTCCAT ATCGGCCTGC TCACGGCCAT TCCAAGCCTG GCCGCGCTGG CCGGCATGCT CATGATCGGG GCCAGCTCCG ACCGCCACCG CGAGCGCCGC TGGCACATCA TCGTGCCGTT CATCATTGGT GCAATCGCCA TGGCCAGCAG CACCTTGTTC AGCCAGAACC TGGTGATGAC CGTGGTGCTG TTCGCCATTG CCTCGGCGGC GATCATCGGC GCGGTGCCGG TGTTCTTCAG CCTGCCGGCG ACCTTCCTCA AAGGCACCGC AGCCGCCACC GGCTTTGCCC TGGCCTGTTC GGTAGCCAAC ATCGCCGGCT TGGTGAGCAA CTCACTGATG GGCGTGGTCA CCGACCTCAC CGGCACCTCG CACGCTGCGC TGTGGGTGTT TGCCGGCTGC CTGATCCTCA GCTGCTTCCT GGTCATCGCC TTGCCGGCCA AGCTGGTCAA CCGCTAG
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Protein sequence | MTACCPGGRP AGALGVFRRC PGSPRRMRGV PGASKTAGLK TTTKSPARRQ EMPIANATTV HSDIDHGTKA LYSKITWRLI PFLCFCYLAA YLDRINVGFA KLQMLEDLQF STAAYGLGAG LFFVGYIIFE VPSNLILQRV GAKLWIARIM ITWGLLSACT LFVTSTTQFY ILRFLLGAAE AGFLPGVLYY LTMWYPTYRR GRIIALFMIG LPLSSVIGGP ISGWIMGHFD QVQGLHGWQW LFLLEAIPSV LLGILTFWAL PNHFQQAKWL SADDKAQLAA DLAADDAEGK DSKHSFRDGF FNLKVWMLGG IDFSILLSAY AMGFWMPTFI RDAGVSDTFH IGLLTAIPSL AALAGMLMIG ASSDRHRERR WHIIVPFIIG AIAMASSTLF SQNLVMTVVL FAIASAAIIG AVPVFFSLPA TFLKGTAAAT GFALACSVAN IAGLVSNSLM GVVTDLTGTS HAALWVFAGC LILSCFLVIA LPAKLVNR
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